KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130071236
Entry
130071236         CDS       T09701                                 
Symbol
gabarapa
Name
(RefSeq) GABA(A) receptor-associated protein a
  KO
K08341  GABA(A) receptor-associated protein
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04068  FoxO signaling pathway
rkg04136  Autophagy - other
rkg04137  Mitophagy - animal
rkg04140  Autophagy - animal
rkg04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    130071236 (gabarapa)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130071236 (gabarapa)
   04136 Autophagy - other
    130071236 (gabarapa)
   04137 Mitophagy - animal
    130071236 (gabarapa)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130071236 (gabarapa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130071236 (gabarapa)
   04121 Ubiquitin system [BR:rkg04121]
    130071236 (gabarapa)
   03029 Mitochondrial biogenesis [BR:rkg03029]
    130071236 (gabarapa)
Membrane trafficking [BR:rkg04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    130071236 (gabarapa)
Ubiquitin system [BR:rkg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   130071236 (gabarapa)
Mitochondrial biogenesis [BR:rkg03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    130071236 (gabarapa)
SSDB
Motif
Pfam: ATG8 APG12 HEAT_Maestro_2
Other DBs
NCBI-GeneID: 130071236
NCBI-ProteinID: XP_056091902
LinkDB
Position
Unknown
AA seq 180 aa
RDVTCAASLGPCYWISLRPPTQLSKKPKLVCKHRRRQVFLDIFNISQPLTMKFMYKEEHP
FEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHL
RAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYRCAGTLLYIAYSDESVYGDVLRDV
NT seq 543 nt   +upstreamnt  +downstreamnt
cgtgatgtgacgtgcgccgcctcccttggtccttgttattggatatccctccgccctccg
acgcagttgtcaaaaaaacctaagctagtttgtaaacaccgtcgacggcaggttttcttg
gatatttttaacatctcccagcccttgacaatgaagttcatgtacaaagaagaacatccc
tttgagaagcgacggtccgagggggagaaaatcagaaagaagtacccggacagagtgcct
gtgatcgttgagaaagctcccaaagccagaataggagatctggacaagaagaaatatctt
gtcccttctgacctcacagtgggacagttctacttcctcattcggaaaaggatccacttg
agggccgaagatgccctcttcttctttgtcaacaacgtcattcctcccacatcagccact
atggggctgctctaccaggagcaccatgaagaagactttttcctttacaggtgtgcagga
accctgctttacattgcctacagtgatgaaagcgtctatggggacgttttgagagatgtg
taa

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