Rhinichthys klamathensis goyatoka (western speckled dace): 130071244
Help
Entry
130071244 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071244
04121 Ubiquitin system [BR:
rkg04121
]
130071244
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130071244
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130071244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Lipoprotein_3
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
130071244
NCBI-ProteinID:
XP_056091917
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAPSPRSLEPPRVAPGREKAGTEKYSSSWFVALPGAALSSLIRLPQVIEVGLSRYLKDVA
AVIRWKSCAAGCDGQSDGEIPLFQSFRSTLPTAQPSATPPTAAYSYTNNNMAEREQLLPK
EMLIDVSSVELHLKRKHAAEWEKCRQLRSENDSSGVSASTPLAKQTTLQQSFSSSVPYEK
SGARWKAITEAITLYIDTDMLPVYSVEKRGFNNLLKVLDARYTVPSRKYFSDVALPQLYN
NTRQKIISELKGIDFYAATTDLWSSRTMQPYMCLTVHYVSESWEMRSVCLQTSYFPQDHT
GQTIAQELKDALNSWGLSEERLSCMTTDSGSNVIRAMKDNNWPNLKCFGHRLHNAVVNGV
KDERIDRAIGVCKKAVSAFSYSWKKRRDMAEVQAELGLPPHQLVTESLTRWGSRQKMIDR
LLEQERAIVRVLGADKKTRHLVPTWQDLEVLDATNKAIKPLQDFTDALSGESYVSVSYIK
PVLHLFKTSLLQREEKDVDLTATIKRNIMCYLEQKYSDPENDELLDMASLMDPRFRTTYI
TLDKLDIVKKRAVTELSALCSEEEGPTVQMCQEESPPKKKTLAAFFKKAAPAASLSHQST
KEKIEAELTSYLLGPEVDPDTNPLEWWKQHQPNFTRLSHLAKKYLAIPATSAPSERVFSV
GGGIVTCNRTCLKPAVVDRLIFLAKNV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctcgccccgatctctggaacctccacgtgtggctcctggacgggagaaggca
gggacagagaaatacagctcttcctggttcgttgcgttgcctggagcagcactatccagt
ttgattcgcctgcctcaggttattgaagtgggactctcacgttacctgaaggacgttgct
gctgttatccgctggaaatcctgtgctgctgggtgtgacggccaaagtgacggagaaata
ccgctcttccagagtttccgtagcacgctccctacggcgcaaccctctgccactcccccg
acggcagcgtattcatatacaaacaacaacatggcagaaagagagcagctccttccgaag
gaaatgctcatcgacgtcagtagtgtggagttgcatttaaagcgaaaacatgcggctgag
tgggagaagtgtcgccaacttcgatcagaaaacgactctagtggcgttagcgctagcacc
ccgttagcaaagcaaacaactcttcaacaaagcttttcaagcagtgtaccgtatgagaag
agcggggcaaggtggaaagccataacggaggcaattaccctctacatagatacggatatg
ctgccagtgtactctgttgagaagagagggtttaacaacttgctgaaagttttggacgct
cgatatacagtacccagccgcaagtatttctctgatgttgctcttcctcagctgtataac
aacactcggcaaaagataataagcgagttgaagggaattgacttttacgctgccactact
gacctgtggtcgagccgaaccatgcagccttacatgtgtcttacggttcattatgtcagc
gagagctgggagatgcgaagcgtctgtctccaaacgtcatatttccctcaggaccatacg
ggccaaactattgcacaagagttaaaggatgctctgaactcctggggcctttcagaggag
cgcctttcctgtatgacgaccgacagtggctccaatgtaatcagggctatgaaggacaat
aattggccaaacctcaagtgctttggacatcgactgcacaatgctgtcgtgaatggtgtg
aaagatgaacggattgaccgtgccattggagtgtgtaaaaaggcagtttctgctttttca
tacagttggaaaaaaagacgggacatggcagaggttcaggcagagctgggtcttcctcct
catcaactggtaaccgagtcactgacaagatggggttcgcgccaaaaaatgattgatcgt
cttctcgaacaagagagagccatcgtccgtgttctgggtgctgataaaaagacccgccat
cttgttcctacatggcaagatctggaggttttagatgccacaaataaagcgatcaaaccc
cttcaggactttactgacgcgttgtccggagaatcttatgtaagcgtttcatacattaaa
cctgtgctgcatctgttcaaaacaagtctccttcagcgagaagagaaagatgtagatctc
actgctacaataaaaagaaacattatgtgctaccttgaacagaaatacagtgaccctgag
aatgacgagctcctggacatggcttctctaatggatccacggttccgtaccacctacatt
accctggacaagttggacattgttaagaaaagagcggtcactgagctttctgccctctgc
tcagaggaagaaggtcctactgtacaaatgtgtcaagaagagagcccacctaagaagaaa
actttagctgccttcttcaagaaagcagcacctgctgcatcactgtcccaccagtcaaca
aaggagaaaattgaagcagagctcacctcctacttactgggtcctgaggtggatcctgac
actaacccacttgagtggtggaagcagcatcagcccaacttcacaagactcagtcatctg
gcaaaaaaatacctggccattccagcaactagcgccccatcggagagggtctttagtgtg
ggtgggggtattgtcacctgtaaccgaacttgcctcaagcctgctgtagttgataggcta
attttcctcgcaaagaatgtttaa
DBGET
integrated database retrieval system
