Rhinichthys klamathensis goyatoka (western speckled dace): 130071261
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Entry
130071261 CDS
T09701
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130071261 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130071261 (taf6)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130071261 (taf6)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130071261 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
130071261 (taf6)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130071261 (taf6)
STAGA complex
130071261 (taf6)
TFTC complex
130071261 (taf6)
SAGA complex
130071261 (taf6)
SLIK complex
130071261 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
130071261
NCBI-ProteinID:
XP_056091936
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAEERRQKLCSVILPTESMKAMAESVGVGSLQEDSCLALSEEVSYRIKEIAQDALKFMHH
GKRRKLMTGDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGSIQS
KGQGATSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDDRTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGARIKAVMDGPVVSNIDKIGADHVQSLLLKH
CASVVAKTRPLPDLVDQYKADFGYLGTMLCSHVIKARAQASFQAQTVNRTTLTITQPRPT
LSMSQSGLSTSGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGAASTQQV
ITLSSSQSGSPVTSTVPSTPTSLQPLVKLESGNTGAVGGSRPLQKYIVVSLPSSSSSLEN
KGTGVLPSSTSPISMESAVKLERSESPAASTQSPH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgcagacagaagctgtgttcggtgatcctccctactgaatctatgaag
gcgatggcggagtcagtgggtgtgggctcactgcaggaagacagctgtctggccctcagc
gaagaggttagctacaggattaaagagattgcacaggatgcactaaagttcatgcaccat
gggaagagacgcaaacttatgactggtgacattgaccatgctcttaaactaaaaaacgtg
gagccgctgtatggattccagtctcaagagttcatcccatttcgctttgcaagtggaggc
ggcagagaattgcatttttatgaagaaaaggaagtggatcttagtgacatcatcaacaca
cccctccctcgagttcctcttgatgtttcactcaaagctcactggttaagcattgatggt
gtccagcctgcaataccagagaacccacctccagcccctaaagagcagcagaaggcagag
tctacagagccgctcaaagctgtcaaacctggacaggaagaggaaggctctatccagtcc
aagggtcagggtgcaacctctgctgaagtcaaaggaaaggagaagatgcggatgaagccg
cgtagcacacacgagctctctgtggaacagcaactgtattataaagagatcactgaagcc
tgtgtgggatcttgtgaagccaaaagagcggaggcactgcagagcatagcaacagaccct
ggcctgtaccagatgctgccaaggtttagtaccttcatctccgagggcgtgcgtgtaaat
gttgttcagaataacctggctttgctgatatacttgatgaggatggtgaaggctttaatg
gacaatcccacactatatttagagaaatatcttcatgaattgatcccagcagtggtgacg
tgtattgtcagtaagcagttatgtttgaggcctgacgtggacaatcactgggctttgcga
gactttgctgctcggctgatggctcagagctgcaagacgttcagcacaaccaccaacaac
atccagtctcgtatcaccaagacctttactaaggcattgttggatgataggactcagtgg
acgactcgttatggctgcattgctggacttgctgaacttgggcatgacgtgatcaagaca
ttgatcatccctcgcctatctgtagagggtgctcgtattaaagctgtgatggatgggcca
gtggtatctaacattgataagattggagccgatcatgtccagagtctgttacttaaacat
tgtgcaagtgtggttgctaaaactaggccactgccagatttggtggatcaatacaaggca
gattttggctatctgggcaccatgctctgttcacatgtgatcaaggcccgtgcacaggcc
tccttccaggcccaaactgttaacagaaccacactcactatcacacagccacggccaact
ctgtcaatgtctcagagtggattgtcaacgtcaggttcacgcacacccagcatcattaaa
gtacccagttcgctcaccctcatgtccactcgccctggaacccccactcagccatcaccc
ccagcaaccaagtatattgttatggcaacaagtgcaggggctgcatccacacagcaggta
atcactctcagctcctcccagtctggatctcctgtcacaagtacagtccccagcaccccc
acgtctttacagccactcgtcaaacttgagtctggaaacacaggtgctgtgggcggctca
cgccctctccagaaatacattgtggtgtctttgccttcatcctcttcctcactggagaac
aagggcacaggtgtccttccctcctctacctcacccatcagcatggagtctgctgtcaag
ctagaacgttcggaatcaccggccgcaagcacacaatcgccacattga
DBGET
integrated database retrieval system
