Rhinichthys klamathensis goyatoka (western speckled dace): 130071417
Help
Entry
130071417 CDS
T09701
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130071417 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071417 (gli1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
130071417 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
130071417
NCBI-ProteinID:
XP_056092197
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MFNPSMTPGACMDPYMRPPHTPPPHGMMGHRGMPPPEGVSGAPYCNPSMMSSHHTLPHHH
PSGSELMGSGDASCFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSR
CGPGAASSYGHLSVGTMSPSLGFSSSMNMNYSRAQGNIYSSPSSCHGPSPRLPTHNPRLH
GPHKHTHMKTEPILGSVMDSINIKSLEEHSEGDVASPSSTGTQDPLLGLLEGRDDLDKEE
KPEPEAVYETNCHWENCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWKDCSREQRPFKAQ
YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNA
SDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRA
SGLTPAGQNSELLIEKEERSREDCKLLAPESTLKSQPSPGGQSSCSSERSPLGSANNNDS
GVEMNLNAAGSLEDLTTQEENGNTGVSESSAGVGSLCMSVQALKRLENLKIDKLKQIRRP
TPPGRSGGNKLPALSATGEMMGMCAPSPLLSNRRVMELSAPDLGGVTGMGMSCQPNDRRG
SGTSSLSSAYTVSRRSSMVSPYLSSRRSSDVSQVGHCQSVMGTDVPGDPLSPQSSQRSGS
CQNAGGLPGLPSLTPAQQYSLKAKYAAATGGPPPTPLPNMDQPGRYLRECHGQPLPPFMQ
QGGIRRNSANAEYGTGVIYPHQAPGNNTRRASDPVRSGADPQGLPKVQRFNSLSNVSLMS
RRNALHHCGSDAALSRHMYSPRPPSITENVMMEAMAMEPHGKTEGNMIPGGDRAYMGYQQ
TQLHPHNASQLSPGQEGLGCMDQVFQSQMQGPYQGQREEICATGVIGQADIANNLLQQAE
YGMSTCQLSPSGPHFPSQGDGSGPWGSTNQLHSPQTGMQFQGVGIQGQHYLQQGVYDPTS
DPGHQRVTVKPEQFHPSMGGSSSCQNIKPLHQHRHNANMQGYPQQGQGLMGRSSNASCDF
LQGQMGTQAGLPQQSQAGSFPSGGGINLALAESRRSQTPMHQMKEMMVRNYVQSQQALLW
EQQQEQSVVDGLSGKPDGIDMGGQTAMIQHSPQHQQPNQNLYPGNAYQGYPNQNLMSPPQ
NRVPGSVKEHTAGMQGSCYGPDIVPRPPQGRKPLSRQNSLSQSQQAGGAYLGSPPHLSPV
HSTASPRRGVRLPPVQQQHSENFTNNNNPMYYTGQIHMHHDIEKPQDGPCLAQQHLTGID
PSTKPTSMAYSEPAPMSNALENLDLENAQIDFTSIIDDPEPSSYSPINPHHHCSSQTSSR
LTTPQTSITLPSGLSNMAIGDMTSMLTSLAGENKYLNTLS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacccctccatgacccctggagcctgtatggacccctacatgcgcccgccacac
acccccccgccgcacggcatgatgggacaccgagggatgcccccacccgagggagtcagt
ggcgccccctactgtaacccgagcatgatgtcatctcatcacacactcccacatcatcac
ccgtcggggtctgaactcatgggctcaggagacgcgtcctgtttctcgacgcctcgctcg
atgctgaagctgagtaagaagcgagcgctgtcgatctctccgctgtcggacgcgagcgtg
gatctgcagaccgtcatacgcacctctccgaactcgctggtggccttcgtgaactctcgc
tgcgggccgggcgccgccagctcgtacgggcatctgtccgtcggcaccatgagcccgtcg
ttgggtttctccagctccatgaacatgaactactcgagagcgcaggggaacatatacagt
tctccatcctcctgtcacgggccgtcacctcgcctgcctacacacaaccccagactccac
ggcccgcacaaacacacacacatgaagacagaaccgatcctgggaagtgtgatggacagc
attaacatcaagagcctggaggagcactcagagggagacgtggcgagtccttcatcaacg
ggaacacaggatcctcttctgggtttattagaaggtagagatgatctggataaagaggag
aaacctgaacccgaggccgtttacgagacgaactgccactgggaaaactgcagcaaagag
ttcgacactcaggagcaactcgtgcatcacatcaacaacgagcacatccacggggagaag
aaggagttcgtgtgtcactggaaggactgttctcgagagcagagaccctttaaagcgcag
tatatgctggtggtccacatgcgcagacacaccggcgagaagccacacaagtgcactttt
gaaggctgtaataaagcgtactcgcgtctggagaacctgaagactcatctgcgctcacac
accggggagaaaccgtatgtgtgtgagcacgagggctgcaacaaggctttctccaatgcg
tcagaccgagccaagcaccagaacagaacacactccaacgagaaaccgtacgtttgcaag
attcccggctgcacgaagcgctacacggacccgagctctctgaggaagcatgtgaagacg
gttcacgggcccgaggctcacatcactaaaaagcaccgtggagacacgggtccacgtgcc
tcaggtctgacccctgctgggcaaaactcagagcttctgatagagaaagaggagagaagc
cgagaggactgcaagttactcgctccagaaagcacactgaaatctcagccaagccccggt
ggccagtcgtcctgtagtagcgaacgttctccactagggagcgccaacaacaacgacagc
ggtgtggagatgaacctgaacgcagcgggcagtctcgaggacctgaccacacaagaggag
aacgggaacaccggtgtgtccgagtccagcgctggcgtggggtcgctgtgcatgtccgtt
caggccttgaagaggttggagaatctgaagattgacaaactgaagcaaattcgccggcca
accccacctgggcggagcggaggaaacaaactaccggctctctcagcaacaggagagatg
atgggcatgtgtgcgccctcgcccttactttccaaccggcgtgtaatggagctttctgct
cctgatctgggtggagtaaccggaatgggaatgtcttgccaaccgaacgatcggcgcggc
agcggcacaagcagcctcagctctgcgtacacagttagccgtcgttcgtcaatggtctcg
ccctacctgtcaagccgacgctccagtgacgtgtcccaggtgggtcactgccaatccgtg
atgggaaccgatgtgcccggtgacccactgtctcctcagagcagccaaagaagtggatca
tgccagaacgctggtggattgccaggtctaccgagtcttacaccggcacaacaatatagt
ctgaaggctaaatacgcggcagcaacaggcggtccaccgccaaccccgctacccaacatg
gaccaacccggtagatacttgagggaatgccacggccagcctcttcctccatttatgcag
caaggaggcataagaaggaacagtgctaatgccgaatacggcacaggagtgatctatcca
catcaggcacccggaaacaacacgagacgtgctagtgatccagtgcgctcaggagccgat
ccgcagggtttacccaaagtgcaacgcttcaatagcctgagcaacgtgtctctaatgagt
cgtcgcaacgcgttgcatcattgcggatctgacgcggctctcagccgccacatgtactcg
cctcgtccaccgagcatcactgaaaatgtcatgatggaggccatggctatggaacctcac
gggaaaaccgaaggcaacatgatcccgggtggagacagagcttacatgggctaccagcaa
actcagctacaccctcacaatgcaagtcaactgtctcctggacaagaaggcttgggatgc
atggatcaagtcttccaatctcaaatgcaaggtccgtaccagggtcagcgcgaggagatc
tgtgcaactggagtgattggtcaagctgatattgcgaacaatcttctacagcaagctgag
tatggtatgagtacctgtcagcttagcccatccggcccacactttcctagtcaaggtgat
ggatcagggccatggggatcaactaaccaactccacagtcctcaaaccggcatgcagttc
cagggtgtaggcatacaaggacagcactaccttcaacagggcgtatatgaccctacatct
gaccctggccatcaaagagttactgtaaaacctgaacagttccatccgtcaatgggagga
tccagttcttgccagaacatcaaacctctacaccagcatcggcataatgcaaacatgcag
ggatatccacagcaaggccaaggcctcatgggcagatcctctaatgcaagctgtgacttc
cttcaaggccagatgggaacgcaagccggtcttccgcagcaaagccaagcgggatcattc
ccgagtggaggaggtataaatcttgcacttgcagaaagccgcaggtcgcagaccccaatg
catcaaatgaaagagatgatggtgaggaactacgtgcaatcccagcaggctctcctatgg
gaacagcagcaggagcaaagtgtagtcgatggtctctctgggaagcctgatgggatagac
atgggaggacaaacggcaatgattcaacacagtccacagcatcaacaacctaaccagaac
ctttatcccggtaatgcttatcaaggctatccgaatcagaacttaatgagcccaccgcaa
aatcgagttcccggttctgttaaggagcatacagctgggatgcagggatcgtgctatggg
ccggatatagtgccaagaccacctcagggacgaaagcctttgagtcgccagaacagtctt
tcccagtcccaacaagcaggtggagcttacctgggaagcccacctcacctcagcccggtc
cactccaccgccagtcccagaagaggagtgcgcctcccaccagtccaacaacagcattcg
gaaaacttcacaaataacaacaaccccatgtactacacaggccagatacacatgcaccat
gacattgagaagcctcaagatggtccatgcctggcgcagcaacacctgactgggatagac
cctagtaccaaacccacatcaatggcctactcagaaccagcgcccatgtccaacgcctta
gaaaacctggacttggagaacgctcagattgactttacctccatcatcgatgacccagag
ccttcatcttacagtccaataaacccacaccaccattgctcctctcagacctcctcccgt
ctcaccacaccccaaacctccatcacccttccaagtggcctgtctaatatggcaatcggg
gacatgacctcaatgctgacgtccctagctggggagaacaagtacttgaacacgttgtct
taa
DBGET
integrated database retrieval system
