Rhinichthys klamathensis goyatoka (western speckled dace): 130071435
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Entry
130071435 CDS
T09701
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130071435 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130071435 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130071435 (pdlim3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130071435
NCBI-ProteinID:
XP_056092243
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLSGGKDFNQPLTITRVTPGSKASRVNLCPGDIILAIQGVSTDGV
THAEAQNKIKDSTNQLFLKIERPETKMWSPQVIEEGQVNPFKINLEADKQDVDYFEHKFN
VRPKPFTTASQRSDSTSQMPGTPSAGSKAAPSAQYNSPIALYSADNVSNTLQQAQMSTVV
RQASPSPKPLTSIEESHVYRMLQEDHELPHEPRQSGSFKALQDYVESDGTRPMVTRSVKA
PVSKPQAATSSLQKLPLCDKCGTGIVGTVVKARDKYRHPACFVCSDCGVNLKQKGYFFVE
GQLYCEAHARMRMTPPEGHDLVTVYPTA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtactagatgggccagccccttggggatttcggctttcaggaggg
aaagatttcaaccagccgctgaccataactcgggtgactccaggcagtaaggcatctcgg
gtcaacctgtgtcccggagacatcatcctggccatccagggagtgtccacagacggtgtg
actcacgctgaagctcagaacaagatcaaagactccaccaatcagcttttcctcaagata
gagaggccagaaactaaaatgtggtcacctcaggttatagaagaggggcaagtaaaccca
ttcaaaatcaatttggaggcagataagcaagacgttgattacttcgaacacaagtttaat
gtcagaccaaagcccttcacaactgcaagccaaaggagtgacagtacatcccagatgcct
ggcaccccatcggctgggtccaaggcagctccttctgcacagtataactcccctattgca
ttatactcagcagacaatgtttcaaacacactacagcaggctcagatgtccactgtagtc
aggcaggcatcgcccagccctaaacccctgacatccattgaagaatcccatgtataccgt
atgctccaagaggaccatgagctgccacatgaaccacgtcagtctggatcgtttaaggcc
ctgcaggactatgtcgagagtgacggcacaaggcccatggtgacaagaagtgtaaaagcc
ccagtgtcaaaaccacaagcggccacatcctcactgcagaagctgcctctctgtgataaa
tgtggcaccggcattgtaggaacggtggtgaaagctcgggacaagtaccgccatccagcc
tgtttcgtgtgctcagactgtggtgtgaacttgaagcagaagggctacttttttgtggag
ggacagttgtactgtgaagcccatgctcgaatgcgaatgaccccacctgagggacatgat
ctagttactgtatatcccactgcttag
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