Rhinichthys klamathensis goyatoka (western speckled dace): 130071559
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Entry
130071559 CDS
T09701
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2 isoform X1
KO
K06246
laminin, gamma 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04382
Cornified envelope formation
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130071559 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130071559 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130071559 (lamc2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Baculo_PEP_C
TetR_C_6
Motif
Other DBs
NCBI-GeneID:
130071559
NCBI-ProteinID:
XP_056092389
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All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MWKMKSSWIFLCAACIWYPIHGTVQSSTTCSCHGKAQYCREDHLGELYCINCQRNTEGRH
CENCKEGYHHQRAGDNCVPCNCNTAGSQGPFCNNEGRCACKQGIYGDKCDRCDDGSQVTP
NGCKPSRLSCRSRNNGRLTYNTEECLPCFCNGHSSVCSSADGYSIHNITSTFENGPEGWR
AATGQGVSSSQVQFRWSPTHKDLEVISKEILPVYLFAPASYLGNKALSYGQTLTFSLRLD
RGVRRPSISDVMLEGAGLKVSASLGDLRTVVPCGKKIAYTFKLDEQPGSKWKPQLSSTEF
QTLLSNLTAIKIRGTFGENGRGYLDDVSLVSAKLGPGTPAVWVEKCRCPAGYDGLFCERC
ATGYRRRYPGQGPRSPCDPCSCQGGTCDPETGGCYSADEIPNLQMCPKGYYVNRQQSNSC
QKCPCPEGEACYVIPGTQDVMCARCPRGTTGSRCEICDDGFYGDPLGEYGPPKQCQPCQC
YGHVDQNAIGNCDRRTGECRKCLNHSNGPKCENCEDGYHHSYPTDPCQACNCNRLGSVSN
SCSDKGQCKCKEGYDGLKCEKSTCPSCFNPVKSKIEVYARQLQEMEDLFKGIGGDDAPVN
DAQMERAIRAAEVMVQNLEIRANELTSTEKQLQDKLASISRSQLREDRNMEALLTTVDGI
RNKDQQYRTEVSEIRNLISDIGLKLQQAKRDIQQAEFPSGDGVPGADTLFDLVQRAADLA
EQHQGEAVTVETIAANSLTESEKALDLIRGVINRENKVKDQVKDLKKLYEADVTKVLDME
NKATKLTDTARKESEVAQNTLKQLSDLEKKLPKPLTKDIAGVVSMFDSLKGMVEGNLSQY
QDFQQYMLNEQKETADLFNKAKTFQQVQDKLLARANAAEAVTNKSLEIFANNKDSLEKTL
ETLKDFDDQIGGNKDLADAAIAKLPAINDTIQKAIADNIKTQDILDAMAPHYRDAQDTID
SLTSTATKLEGMSDSLPSSSDILEAATKLKADVDGLNIQASVTRDRLNEEKNKAKAQINQ
AKNAVMESTGALGNAKNARDAVSDTLKTITDIMSSLGTPGTVDDKRVADLENAIAKSRNR
VEKELRPRLRELEEKEAQLRASISGMINDIDTILADIANLEEIRKNIPNGCYNIPPIERP
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaatgaagagcagttggatctttctgtgcgcagcttgcatctggtatccaatt
cacgggacagttcaatcctccactacttgttcgtgtcatggtaaagctcagtactgcaga
gaagatcatctaggagaactgtactgtataaactgccagagaaacacagaagggcggcac
tgtgaaaactgtaaggaaggataccaccaccagagggcaggagacaactgtgtgccttgc
aactgcaacactgcaggttctcaaggaccgttctgcaacaatgagggacggtgtgcgtgt
aaacagggaatttatggagacaagtgtgatcgctgtgatgatggctctcaagtgactccc
aatggatgtaagccttcgaggctaagctgtcggtcacgtaacaatggccgtcttacatat
aatacagaggagtgtctgccctgcttttgcaatggccattcaagtgtgtgctcttcagct
gacggatattccattcacaacatcacttcaacttttgaaaatggacctgagggctggcgg
gctgccactggtcaaggtgtgagctcctcacaagtgcaattcaggtggtctcccactcac
aaagaccttgaggtgatctctaaagagatccttcccgtttatctgtttgctcccgcatct
tacctggggaataaggcattgagctacggtcagacactcaccttctctctgcgtctggac
agaggcgtccgtcgtccttccatctctgatgtcatgctagaaggagcaggtcttaaggtg
tctgcttcactaggagacttgagaactgtggtgccctgtggaaagaaaatcgcctacacg
ttcaaactggacgaacagcctggaagcaaatggaaaccgcaactctcatccacggaattt
caaacacttctgagcaatcttacagccattaaaatcagaggaacatttggtgaaaatgga
cgtggttatctggatgatgtctctctggtgtcagctaaactgggtcccggcacccctgca
gtctgggtagaaaagtgcagatgccctgctggttatgatggactgttttgtgagcgctgt
gccactggatacaggaggcgttaccctggtcaaggcccccgaagcccctgtgatccctgc
tcctgtcagggtggaacatgtgatccagaaacaggaggctgttactcggctgatgagata
ccaaatctgcagatgtgccctaaaggttattatgtcaaccgccaacagtccaactcctgc
cagaagtgtccttgtcccgagggtgaggcttgctatgttattccaggaacccaggatgtg
atgtgtgcccgctgtccccgggggactacaggctctcgttgcgaaatatgtgatgacggt
ttttatggagaccccctgggagagtatggccctcccaaacagtgccagccctgccagtgt
tatggccatgtggaccagaacgccatcggcaactgtgaccgccgaacaggggagtgtcgg
aagtgcctgaaccacagcaacggccccaagtgtgagaactgtgaagatggataccaccac
agttaccccacagacccatgtcaggcctgcaactgcaatcgtctgggctctgtgtcgaat
tcatgcagcgataaaggccagtgcaagtgtaaggaaggttacgatggactcaagtgtgag
aaatcaacatgtccatcctgctttaacccagtcaagagcaagatagaggtttatgcacga
cagctgcaggaaatggaggatttatttaaaggaattggaggtgatgatgctccagtcaac
gatgctcagatggaacgggctattagggccgcagaagtcatggtccaaaacctggaaatc
agagcaaatgaactcacaagtacagagaaacagcttcaggataaactggcgagcattagc
cgatcccagctgagagaggacagaaacatggaggctttgttgacaacagtggatgggatc
agaaacaaggatcagcagtacagaacggaagtttcagaaatccgtaacctcatcagtgac
atcgggttaaaactgcaacaggccaaacgggacatccagcaggctgagtttccctcaggt
gatggggtgccaggtgctgacaccttgtttgatttggttcagagagctgctgatcttgct
gagcagcatcaaggtgaggcagtgacggtggagaccattgcagccaattctctaaccgaa
tctgagaaagccctagatctcatccgaggtgtcatcaaccgagaaaataaggtcaaagac
caggtcaaggacctcaaaaaactgtatgaagcagatgtaaccaaagtacttgacatggag
aataaggccactaaactaactgatacagccagaaaggagagcgaagtagctcagaacact
ctgaaacagttatctgacctggagaagaaacttccaaagcctctgacgaaggacattgct
ggtgtggtttccatgtttgacagtctgaagggtatggtggaggggaatctatcacaatac
caggactttcagcagtatatgctcaatgaacagaaagagacagctgatctgttcaataag
gccaagactttccaacaggttcaagacaaacttcttgccagggcaaacgcagctgaagca
gtcacaaataaatctctggaaatctttgccaacaacaaagatagtctggaaaagacacta
gagacgctcaaagattttgatgaccagattggtggtaataaggatcttgccgatgctgcc
attgcaaaactgcctgccatcaatgacaccatccagaaggccatagcagacaacatcaag
actcaggacattttggatgcaatggctcctcactacagagatgctcaggatactattgac
tctcttacaagcactgcaaccaaactggagggaatgtccgattctcttccgtcttctagc
gatattttggaagctgcaaccaaactgaaagcggacgtagatggactgaatatacaagca
tctgtaactagggacagattgaatgaagagaaaaacaaggcaaaagcacagattaatcaa
gcgaagaatgctgtcatggagtctactggagcacttggaaatgcaaagaatgccagggat
gctgttagtgatactttaaagacaatcactgatattatgagctcactgggaactcctggg
acagtcgacgacaaacgagtggccgaccttgagaacgccatcgctaaaagccgcaaccgc
gtggagaaagagctgaggcccagactcagggagctggaggagaaggaagcccagctgaga
gccagcatttcaggcatgatcaatgacatcgacaccatcctggctgacattgccaactta
gaggagatccgtaaaaacattccaaatggctgttacaacataccacctattgagaggccg
taa
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