Rhinichthys klamathensis goyatoka (western speckled dace): 130071650
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Entry
130071650 CDS
T09701
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130071650
04518 Integrin signaling
130071650
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130071650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130071650
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130071650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_Teneurin
EGF_TEN
Fibrinogen_C
EGF_Tenascin
EGF_2
fn3
DUF7949
hEGF
EGF_PEAR1L
EGF
EGF_integrin
Fn3_Dep-1_3rd
FN3_Tor_3rd
Fn3_PBP1
Ig_J
Motif
Other DBs
NCBI-GeneID:
130071650
NCBI-ProteinID:
XP_056092486
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MFLLNMVFVLAFLLLSPPVLSSGAQDLRSQPVKVIISDTCVQDGSGEKEMLLEPGSPLVL
THRIRLVSGSSSDTGSGCQCELDFAALRERMERLEKEVSDLREKCGGPDGCCSSQQSKGL
VCTTGRPETDECPDDCSDQGRCVDGKCVCFPGFSGPDCSVPDCPGDCSNRGRCVNGQCVC
DPGFSGPDCSGKTCPENCNNRGRCVNGKCVCDSGFAGQDCSVKTCPDDCSKRGQCVDGKC
VCESGFTGQDCSSRSCPGDCSDRGQCVNGQCVCESGFTGPDCSSQACPSNCNSKGRCVNG
RCVCESGFKGPDCSSSTCPGDCSDRGRCVNGRCVCESGFTGPDCSSSTCPGDCSDRGRCV
NGRCVCESGFTGPDCSSRSCPGDCSDRGRCVNGQCVCESGFTGPDCSSRSCPGDCSDRGR
CVNGQCVCESGFTGPDCSSQACPSNCNSKGRCVDGKCVCDVGFSGQDCSSKTCPNSCSDR
GRCVRGRCVCRRGFTGADCSECQSGLTGENCDTALSAVSRLSTRNISESSVTLSWTPAAV
QYDTFIISFTSTKETDQKIISRISGRLNTYTQVGLAAGQEYMVSVTGEKDGMMGTESTTQ
FTTLVSGPKDLHVVKTSTTTVVVQWEKAQGEIDRYVLSVAPNQTEGSVRLPEMILAPERD
SARIQGLQPGRLYDISLVAERGSVRSRPATVQATPGPEPPSDLVFSDVTDSSFTVSWAKP
KSKVSGFKITHTHVQEGEPVSVSVDSETLRLDLAPVSPGSSYEVSVASVLGRDESDSITD
TVTTLPDPPTDLRVINVTDSKALLLWRPALATVDHYIIEYSSDAAPGITMEVSGNAAEEQ
LQALRSSTRYSVSIQSRLRDLSSSRATASFSTTGAGKTVEGPRDLKASQVTPRTALLSWK
PPVSAITGYKLSYFTDGQEIQEVTVDPTVTELNLSRLIPSSRYTAVLRAESSSTTVSTDF
STGNLRFPFPADCSQEQQNGAQESGIVDVFPQGREGKALMVYCDMETDGGGWTVFQRRKD
GKTNFFRSWREYSSGFGALDGEFWLGNELLHNFTKASPVALRVDLRAGDEAVYARYSSFS
VDSARKHFTIRVSGYSGTAGDAMSYHNARPFSTHDRDPQPFITRCAMSYRGGWWYKNCHE
ANLNGLYNTNTNHQGVIWTQWKGKDFSIPFTEMKFRPSSFRP
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcttaaacatggtgtttgtgttggcattcctgctcctgtctcctccagtcctc
tcatcgggagctcaggatctcagatcccagccggtgaaggtcattatctcggacacatgt
gttcaggacgggtctggagagaaagagatgctcctggagcctgggtctcctctggtcctg
acccatcggatccggctggtgtccggctcgagctcggacaccggctctggctgtcagtgc
gagctggactttgcagcgttgcgggagcgaatggaaagactggagaaggaggtgtcagat
ctaagggagaaatgtggaggtccggatggatgctgttcctcccagcagagcaaaggtttg
gtctgcaccaccggtcgtcccgagactgacgagtgtcccgatgactgcagtgaccagggc
cggtgtgtggacgggaagtgtgtgtgtttcccaggattcagcgggcctgactgcagtgtc
ccggactgtcctggagactgcagtaacaggggccggtgtgtgaacggacagtgtgtgtgt
gacccgggcttctctgggccggactgctctgggaaaacatgtccggagaactgcaacaac
cgcggccggtgtgtgaatgggaagtgtgtgtgtgactctggattcgcgggtcaggactgc
tctgtgaaaacatgtcctgatgactgcagcaaacgaggacagtgtgtcgatggaaagtgt
gtgtgtgagagcgggttcacaggtcaggactgctcgtccagatcgtgtcctggagactgc
agtgaccggggccagtgtgtgaacggacagtgtgtgtgtgagagcggcttcacgggtccg
gactgctcgtcccaggcctgtcccagtaactgcaatagcaaaggcaggtgtgtgaacggc
aggtgtgtgtgtgagagcggcttcaagggtccggattgctcgtccagcacgtgtcctgga
gactgcagtgaccggggcaggtgtgtgaacggcaggtgtgtgtgtgagagcggcttcacg
ggtccggactgctcgtccagcacgtgtcctggagactgcagtgaccggggcaggtgtgtg
aacggcaggtgtgtgtgtgagagcgggttcacaggtccggactgctcgtctagatcgtgt
cctggagactgcagtgatcggggccggtgtgtgaacggacagtgtgtgtgtgagagcggg
ttcacgggtccggactgctcgtctagatcgtgtcctggagactgcagtgatcggggccgg
tgtgtgaacggacagtgtgtgtgtgagagcgggttcacagggcccgactgctcgtcccag
gcatgtcccagtaactgcaatagcaaagggaggtgtgtggatgggaagtgtgtgtgtgac
gtgggcttctccggtcaggactgctccagcaaaacctgcccgaacagctgcagtgaccgg
ggccggtgtgtgaggggccggtgtgtgtgtcgacggggcttcacgggggccgactgcagc
gaatgccagtctgggttgacaggggagaactgtgacaccgcgctgtcggccgtgtctcgt
ctcagcaccagaaacatctctgagtcctccgtcacactgtcctggactccagcagccgtg
cagtacgacaccttcatcatcagcttcaccagcacgaaagaaacggatcagaaaataatc
tcccggatcagcggaagactgaacacatacactcaggttggactggccgccggtcaggaa
tacatggtcagtgttactggagagaaggatggcatgatgggaacggagagcacaacacag
ttcaccacattggtctccgggccgaaagacttgcacgttgtgaagacgagcaccacaaca
gtcgttgtccaatgggagaaggcgcagggggagattgacaggtacgtcctctccgttgca
cccaatcagacggaaggatccgtcagactcccggagatgatcctggcgccggagagggat
tcggcccggatccagggcttgcaaccgggacgcttgtatgacatctcattggtggcagag
agaggcagtgttcggagccggccagcaaccgtacaggccactcctggcccggagcctccg
tcggatctggtcttcagcgatgtgaccgacagctccttcaccgtgtcctgggccaaaccc
aagagcaaggtgtccggattcaagatcacacacactcacgtacaagaaggtgagccggtc
tctgtcagtgtggactcggagacgctccgcctggatctcgctccggtgtctcccggctcc
tcatacgaggtcagcgtggcgtcggtgctcggccgagacgagagcgactccatcacagac
accgtgaccaccctgccggatcctccaacagacctgcgggtcataaacgtcaccgacagt
aaagcgctattgctatggagacccgccctggcaaccgtcgaccattacatcatcgagtac
agctcggacgcagcccctgggataaccatggaagtgtccggaaacgcagcagaagagcag
ctgcaggcgctgaggtcctcgacccggtacagcgtgagcatccagagccgactgagagat
ctgagcagctccagggccaccgcaagcttcagcaccacaggtgccggtaaaacagtggaa
ggtcctcgtgatctgaaggccagtcaggtgacgcctcgcactgcactgttgtcatggaaa
ccgcctgtctccgccatcactggttacaagctgagctacttcacagacggccaggagatc
caggaagtgacggtcgatcccacagtgacggagctgaacctgagccggctgatcccgtcc
tcccgatacacagctgtcctgcgggccgagagctcctccacaaccgtctccaccgacttc
agcaccgggaatctccggttcccgtttcccgctgattgctcccaggagcagcagaacgga
gcgcaggagtcagggatcgtggatgtgtttccgcagggccgggagggaaaggctctgatg
gtttactgtgacatggagacggacggaggcggctggacggtgtttcagcggagaaaggac
gggaagacgaacttcttcaggagctggcgggaatacagcagtggattcggagcgctggat
ggggaattctggctcgggaacgagctgcttcataacttcactaaagcgagtccagtggcc
ctgagagtggacctgagagccggagacgaggccgtttacgctcgttactcctcgttctcc
gttgacagtgcaaggaaacactttaccatcagagtctctggatactcgggtacagctggc
gacgcgatgtcataccacaacgcgcgcccgttctccacgcatgaccgagacccgcagccc
ttcatcacgcgctgcgccatgtcttaccggggcggctggtggtacaagaactgccacgaa
gcgaacctcaacgggctgtacaacaccaacaccaaccaccagggagtgatctggacgcag
tggaaaggcaaggatttctccattcccttcactgagatgaagttccggccctcttcgttc
cggccctga
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