Rhinichthys klamathensis goyatoka (western speckled dace): 130071652
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Entry
130071652 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071652
04121 Ubiquitin system [BR:
rkg04121
]
130071652
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130071652
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130071652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
DUF659
Chordopox_A30L
Motif
Other DBs
NCBI-GeneID:
130071652
NCBI-ProteinID:
XP_056092489
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MPFQIVERPGFLRLMKVAVPHYKVPSRKYFSKTEIPNLYNQVKADVLKKLAQGTWFAATT
DLWTSESGGGQPYISVTIHYLTPDWQLESNCLETQFFPEDHSAQNISEFFDNMLEEWGIN
KKDLVCITTDNATNMIKAFEEFSEVWLGCFGHNLNLAISKALKIQRVETAVKACRHLVQG
FSRSWKRRRELRQKQAALNMPQKALIHDVVTRWGSTHKMVERFLSQQQPVCATLAGERGT
WHLMPKDTDITVMEQLCQLLEPLSKLTDALASETRVTLSAIKPVLDHINSDVLVEKDTDT
SLTKEMKKLMREDLKNRYPDKAKRVMNMACFIDPRFKRSSLDEPEASKIETDCVQEAVKL
AAQVREEPQSTSTSSSISTSTPPAASEGKGLAGLLRKISSVTRQQRGEEGQIPTTLEDSV
KQEIKVYLSLPPIPAEEDPLVWWKGHASELPHLARVARKLLCIPATSVPSERVFSASGHI
VSPQRALLKPDKVNMLTFLHFNLK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccatttcaaattgtggagaggcctggttttctgaggctgatgaaagttgctgtacca
cactacaaagtgccatcacgaaaatatttttccaaaactgaaataccaaatctgtacaac
caggtcaaagctgatgttttaaaaaaattagctcaaggaacatggtttgctgcaactact
gacctctggactagtgaaagtggtggtggtcaaccctacataagcgtcactatccattac
ctcactccagactggcaactggaatcaaactgcctcgaaactcagttcttcccagaagat
cactcagctcaaaacatcagcgagttttttgataacatgctggaagaatgggggatcaac
aaaaaagacctggtctgcataaccacagacaacgcaacgaacatgataaaggcttttgaa
gagttttcagaagtgtggcttgggtgctttggccataatttgaacctggccatctcaaag
gctttgaaaatacagagagttgaaacagcagtcaaggcctgccgtcatctggtccagggc
ttctcacggagctggaagagaaggcgagaactgaggcaaaaacaagctgccctcaacatg
ccacagaaggctctaattcatgatgtggtgactcgatggggatctacacacaagatggtt
gagcggttccttagtcaacagcaaccagtctgtgcaacactggctggagaaagaggaaca
tggcatctaatgcccaaggataccgacataactgtcatggagcaactgtgccagctcctc
gaacctctgagcaagttaacagatgcacttgcctcagaaacacgagtaacactctcagca
atcaagcctgtcctggaccacattaattctgatgttctggtggaaaaggacacagataca
tccctgaccaaggagatgaaaaagttaatgagagaagacctcaaaaatagatacccagat
aaggcaaagagagtcatgaacatggcttgtttcattgacccccgcttcaaacggagctct
ttagatgagcctgaggcttcaaaaattgaaactgactgtgtccaggaagctgtgaagctg
gctgcacaagtcagggaagaaccacaaagcacctccaccagcagcagcatctctaccagc
actccaccagcagcatcggaggggaaaggccttgccgggttgctgagaaagatttcttca
gtgacaaggcagcaaagaggtgaagagggtcagattccaaccactctagaagacagtgtg
aaacaagaaatcaaagtctacctgtctctgcccccaattccagcagaagaggatccactg
gtgtggtggaagggccatgcatcagagctgcctcaccttgccagggttgccaggaagctt
ctgtgcatcccagcaaccagcgtgccatcagagagagtgttcagtgccagtgggcatatt
gtctctcctcaaagagcattacttaaaccagacaaagtaaacatgctgacatttttgcat
ttcaatctcaagtga
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