Rhinichthys klamathensis goyatoka (western speckled dace): 130071751
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Entry
130071751 CDS
T09701
Symbol
rxrab
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04148
Efferocytosis
rkg04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130071751 (rxrab)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130071751 (rxrab)
03320 PPAR signaling pathway
130071751 (rxrab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071751 (rxrab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130071751 (rxrab)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130071751 (rxrab)
Nuclear receptors [BR:
rkg03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130071751 (rxrab)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
130071751
NCBI-ProteinID:
XP_056092589
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All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
METKPFLSLGLLKNPCTVARSWSGDAGSSPNGCSGFMGAYPLQQRRISTDSSGQLSSPPL
SSSMGHRGISNHPLHQPLLSPSAMSSSPGQLHSPINGLSSPFPVISSPLGHPSMSGPSST
SMSFRPSLSPQLSSPMNAVSSSEDIKPPLGLNGMMKVPAQPTGTSLSLTKHICAICGDRS
SGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKR
EAVQEERQRAKERSEAEFGSCANEDMPVEKILDAELAVEPKTETYVEANLSPPANSPNDP
VTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSIAVKDGI
LLATGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLS
NPSEVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPHQMT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccattcttgtctctggggctcctgaaaaacccctgcacagtagcgcgg
agctggtcgggcgacgctggcagttcgcccaatggctgctctggcttcatgggggcgtac
ccgctacaacagcgcaggatatccacagactcctccggtcagctctcgtcgcctcctttg
agctcctccatgggtcaccgaggcatcagtaaccatcctctgcaccagcccctgctcagc
ccgtctgccatgagctccagcccgggtcagctgcactcgcccatcaacggcctgtcctcg
ccgttccccgtcatcagctcgcccttgggccatccctccatgagcggcccgtcctccacc
agcatgtccttcagacccagtctaagcccacagctcagttcgcccatgaatgcagtcagt
agttcggaggacattaaaccccctctgggtctgaacgggatgatgaaggtcccggcacag
cccacaggcacatccctctccctcacaaaacacatctgtgccatttgcggagaccgttca
tcaggtaaacactacggggtgtacagctgtgagggatgtaagggcttcttcaagagaacg
gtgagaaaggatttgacgtacacttgccgagacaacaaggactgtttaatcgacaaacgg
caacgcaaccgctgccagtactgccgctatcagaagtgcttagccatgggaatgaagaga
gaagccgttcaggaggagcggcagcgggcgaaggagcggagcgaggctgaattcggcagc
tgtgccaacgaggacatgcccgtggagaagattctggatgccgaactggcagtggaacca
aagacggagacctacgtggaggccaacctgagtccgcctgccaactctcctaacgaccct
gtaacaaacatctgccaagcagctgacaagcaactctttaccttagtggagtgggccaag
cggatacctcacttttctgatctcccgttggacgatcaagtcatcctccttcgagcaggg
tggaatgaactcctgattgcctctttttcgcatcgttccatagctgtaaaggatgggata
ttattagctacaggccttcacgtccatagaaacagcgcacatactgccggtgtgggagcc
atctttgacagagtgctgacagagcttgtgtcaaagatgagagacatgcaaatggacaag
actgaacttggatgcctgcgggccattgttctgttcaatccagattcaaaaggactgtct
aatccatcagaggtggaggcattaagagaaagagtgtatgcttctctagaggcctactgt
aaacacaaataccctgatcagcctgggagatttgccaagctgttactgcgtctgcctgcc
ctgcgctccatcggcctgaagtgtcttgaacatctcttctttttcaagttaatcggggac
acgcccatcgacacttttctaatggaaatgctcgaggcgccacaccaaatgacatga
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