Rhinichthys klamathensis goyatoka (western speckled dace): 130071778
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Entry
130071778 CDS
T09701
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
rkg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130071778 (ddx19b)
03015 mRNA surveillance pathway
130071778 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130071778 (ddx19b)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130071778 (ddx19b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130071778 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130071778
NCBI-ProteinID:
XP_056092632
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISTLQINEKDDKPKAEANGAKTEGNGNKTEGNGNKTEGNGS
KTEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQG
VYAMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCL
CVSPTYELALQTGKVIEQMGKFYPEVQLVYAIRGNKLERGTRLQEQVVIGTPGTVLDWCQ
KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEETVWNFAK
RIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTA
GWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVI
NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKL
DTDDLDEIEKIAN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagattcgtgggcccaggctgtcgatgaacaagaagccgctgcggaatcgata
agcaccttgcaaataaatgaaaaagatgacaagccgaaagctgaagcaaatggagcaaag
acagaaggaaatggcaataaaacagaaggaaatggcaataagacagaaggaaatggcagt
aaaaccgaggaagatgataaagacgacaaggcagcacagtcactgttgaataaactgatc
cgcagtaatctagtgaacacgaccaatcaagttgaagtcctccagagggatccgagctct
ccactgtactcggtcaagtcatttgaagagctgcgattaaaacctcagctgttgcaagga
gtgtacgccatgggtttcaacaggccctccaaaatccaggagactgcattgcccatgatg
ctcgcagaacctccacagaatctcatcgctcagtctcagtcaggcacgggtaaaacggct
gcctttgtgctggccatgttaagtcatgtggaccctgaaaacaaatggcctcagtgtctg
tgtgtgtctcccacgtatgagctggctctgcagacaggcaaggtcattgagcagatgggg
aagttttaccctgaagtccaactagtgtatgccatcagaggaaacaaattggagcgggga
acaagactacaggagcaggtcgtgattggcactccgggaactgttttggattggtgccaa
aagctcaaattcatcgaccccaagaagatcaaagtgtttgtgctggacgaggctgatgtc
atgatcgctacacagggccatcaagaccagagtattcgcatccagaggatgcttcctaaa
acttgccagatgctcctgttctctgccacatttgaagaaactgtgtggaactttgcgaag
aggatcgttcctgaccccaacattattaaactgaagcgtgaggaggagactctggacacc
atcaagcagtattatgtcatctgcaacagcaaggaggagaagttccaggctttgtgcaac
atctatggagccattactatcgcacaggccatgatcttctgccacaccaggaaaacggcc
ggctggctggcaggagagctgtccagagaaggccaccaggtggcgctgctcagcggagag
atgcaggtggaacagagggcagcggtcatcgagcgcttccgtgacggcaaggagaaagtc
cttgttaccactaatgtctgtgctagaggtattgatgtggagcaagtttcagtggtcatc
aacttcgatctgccagtggataaggatggcaaccctgacaatgagacgtatttgcacaga
atcgggcgcactgggaggttcggcaagagagggttggcgatcaacatggtggacagcaga
tttagcatgaacatcctcaaccgcatccaggagcacttcaataagaaaatcgagaagctg
gacacagatgatttggatgaaattgagaaaatcgctaactga
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