KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130071805
Entry
130071805         CDS       T09701                                 
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
  KO
K10839  UV excision repair protein RAD23
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03420  Nucleotide excision repair
rkg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130071805 (rad23b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130071805 (rad23b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rkg03051]
    130071805 (rad23b)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130071805 (rad23b)
Proteasome [BR:rkg03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    130071805 (rad23b)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      130071805 (rad23b)
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD Crinkler Rad60-SLD_2 PARM UBA_3 Dsc3_N Ubiquitin_5 Ubiquitin_4 DUF1421 TFIIF_alpha Med13_C CytochromB561_N
Other DBs
NCBI-GeneID: 130071805
NCBI-ProteinID: XP_056092670
LinkDB
Position
Unknown
AA seq 389 aa
MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKDGFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPASSSSSGSASSSSVATATGSASSSSITTATTPTATPETP
TSTPAKDDKPTEEKPAGSTAPSSTPASSDSSPNANIFEEATSALVTGQSYENMVTEIMLM
GYERDRVVAALRASFNNPDRAVEYLLTGIPAEGEGSVGAADPVAPVGGAPLVTSGLSSPS
STAPSQPSTGSGANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSH
QEQFIQMLNEPVQEAGQAGSGGGAGGVAAGVAEAGGMNYIQVTPQEKEAIERLKALGFPE
GLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgcagatcacgctgaaaaccctccagcagcagacgtttaaaatcgacatcgacgcggag
gagacggtaaaagccttaaaggaaaaaatcgagaatgaaaagggaaaagatggctttccg
gtggcgggacagaagctgatatacgcaggcaaaattttgaacgatgacacggcgctcaag
gagtacaagatagatgagaagaacttcgtggtggttatggtagcaaagcctaaagcggct
cctgcatcttcatcttcatctggatccgcctcctcctcatctgttgccacggcgaccggc
tccgcctcctcctcctccatcactacagcgacgaccccgactgcgaccccagaaaccccg
acctcgaccccggccaaagacgacaaacccaccgaggagaaaccagccggcagcactgcg
ccctcctccacacccgccagttcggattcttcgccaaatgcaaacatatttgaggaggcg
acgtctgcgctggtgacggggcagtcctacgagaacatggtgacggagatcatgttgatg
ggatacgagcgggacagagttgtggcggcactgagggccagtttcaacaatccggaccgc
gccgtggagtacctgctcacgggcatccccgcggagggcgagggcagtgtaggagctgct
gacccagtggctccagtaggtggcgctcctcttgtaacctcgggtctctcttcaccgtcc
agtaccgccccgtcacagcccagcacaggatcaggcgccaatcctctggagttcttgagg
aaccagccacagttcctgcagatgagacagatcatccagcagaacccgtctctgctacca
gctctactacagcagatcggcagagagaacccacagctcctgcagcaaatcagcagccat
caggagcagttcatccagatgctgaacgagccggtccaggaggcggggcaggcgggcagt
gggggtggggctgggggcgtggccgcgggcgtggccgaggcgggaggcatgaactacatc
caggtcacgccgcaggagaaagaagctattgagaggctaaaagccctcggattcccagaa
ggactcgttatacaggcttacttcgcgtgtgagaagaatgaaaatctggccgcaaacttc
cttttacaacagaactttgatgatgattag

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