Rhinichthys klamathensis goyatoka (western speckled dace): 130071826
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Entry
130071826 CDS
T09701
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03030
DNA replication
rkg03410
Base excision repair
rkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130071826 (pole2)
03410 Base excision repair
130071826 (pole2)
03420 Nucleotide excision repair
130071826 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130071826 (pole2)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130071826 (pole2)
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130071826 (pole2)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
130071826 (pole2)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
130071826 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
130071826
NCBI-ProteinID:
XP_056092694
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MKMDARRVKLKVSAGFKMRGLILRPESSRFLLQVLESVSEADLDEVLERILDAVEKQPLS
SSMIELSVAEAAVQDCSQSCDETIDNVFNIIGAFDVPRFVFSSERKKFVHVGMTTHAVPK
LCGESRDKAELFRERYTILQQRTHRHELFTPPVIGSTPDEGRNKFQLKTVEALLGSTAKV
GEVIVLGMITQLKEGKFYLEDLSGTVQLNISKAQFHSGLYTESCFVLAEGWYEDSVFHVN
AFGFPPTEPSSFTRAYYGNINFFGGPSTTAVKASAKLKQLEEENEDAMFVIVSDVWLDSV
EVLEKIHTMFSGYSAMPPTCFIFCGNFSSAPYGRNQLQTLKDSFKALADLICEFPSIHNS
SRFVFVPGPEDPGPGTVLPRPPLAEHLTEEFRERVPFSVFTTNPCRIQYCSQEMVVIRED
LVNKMCRNCVRLPSSNLDIPSHFVKTILSQGHLTPLPLYVCPVYWAYDYALHVYPVPDVI
VFADKYDPFNVSNTDCLCINPGSFPKSGFSFKVYYPSNRTVEDSKLQGL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacgcgcgcagagtgaagctgaaagtgagcgcgggatttaaaatgcgcgga
ttaatcctgcgaccggagtccagccggtttctgctgcaggttctggagtccgtcagtgaa
gcggatctggatgaagttctggagagaatcttagatgctgttgaaaagcagcctctgtcg
tccagcatgattgaactgtctgtggcagaagcggctgttcaggactgcagtcagtcatgt
gatgagaccattgataacgttttcaacatcatcggagccttcgatgttcctcgattcgtc
ttcagctcagagaggaagaaatttgtacatgtcggcatgacgactcacgcggtgccgaag
ctgtgcggcgagtccagagataaagccgagctcttccgagagcgatacaccatcctgcaa
cagcgaacacacaggcacgagctcttcactcctccggttattggttcaactccagatgaa
gggagaaacaagttccagctgaagacggtggaagctctcctgggcagcacagctaaagtc
ggagaagtgatcgtcctcggcatgatcacacagctgaaagagggcaagttctacctggag
gacctcagtggcacagtgcagctcaatatatcaaaggcacagtttcacagcggcctttac
acagagtcctgcttcgttctggctgagggatggtacgaggattctgtgttccatgtcaac
gcgtttgggttcccgcccacagaaccctcttctttcaccagggcatattatggcaatata
aacttctttggtgggccgtccaccactgcggtcaaagcgtcagccaaactcaagcagctg
gaggaggagaatgaagacgccatgtttgtgattgtgtcggatgtgtggctggacagtgtg
gaggtcctggagaagatacacaccatgttctcaggatactccgccatgccgcccacctgc
ttcatattctgtgggaacttctcctccgctccgtacggcaggaaccagctccaaacactc
aaagattcttttaaagcgcttgctgatctgatttgtgaatttcccagcattcacaacagc
agtcgttttgtgtttgttcccggaccagaagacccggggcccggcacggtcctgcccaga
cctccgctggcggagcatctcacagaagagttccgagagcgcgtgccgttctccgtcttc
accaccaacccctgcaggatacagtactgcagtcaagagatggtggtgattcgagaagac
ctcgtcaacaagatgtgccgaaactgtgttcgactcccaagcagcaacctggatatccct
tcccattttgtgaaaaccatcctgtcacaaggtcacctgacgccgctcccgctctacgtg
tgtccggtgtactgggcgtatgattacgccttacacgtttatcccgttcctgatgtcatc
gtcttcgctgataaatacgaccctttcaacgtctccaacacagactgcctgtgcatcaac
ccgggttcttttccaaaaagtggattctcctttaaagtttactatccgtccaatagaaca
gtggaagacagcaaattgcaagggctttaa
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