Rhinichthys klamathensis goyatoka (western speckled dace): 130071897
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Entry
130071897 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071897
04121 Ubiquitin system [BR:
rkg04121
]
130071897
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130071897
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130071897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
130071897
NCBI-ProteinID:
XP_056092782
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MVDTRYEEAKEKAKEKLDNVVAVSLTSDMWTSINMEAYLAVTCHFIDANDQLGTILLGVQ
HFPNTHTADNLAIAHTMAMEEWGIKDKVRCLVTDAAANMIACVRALNIRHAICIAHALNL
IVKKSFDDVPGLNELRTKCRKLVTYFRTSTTGKERLAQVQVQMGRPALKMIIEVDTRWNS
TYSMLERLYDLREPVGAALASLRTDVSPPTSLEYETMKDALDLLAPFHQATVELSAEKRV
SASKVIPLMKMLNHTIVRKSEGLTSNMARQLADNLVRRVREHALQMESISVMTMPTLLDP
RLKKLGFLSPGKLQEAITRLKSECANVIRNSETTPPAQVPASQAGPSTTCGDLWHLLDST
VDNSRRSSSVTADATIEVDRYLSETNLARTEDPLGYWNKQKLQHPNLYKLALTFLCCPAS
SVPCERVFSKAGEVVSKKRNRLNPNTVKKLLFLNKNQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggttgacacccggtatgaggaggctaaggagaaggccaaagaaaaattggacaatgtt
gttgctgttagccttacgtccgacatgtggacgtccatcaacatggaggcttacctggct
gtgacttgtcattttattgatgccaatgaccagcttgggacaatcttgcttggggtgcaa
catttcccaaacacccatacggcagacaacttggctattgcccataccatggccatggag
gagtggggcataaaggataaggtgaggtgccttgtcacggatgctgctgccaatatgatt
gcctgtgtgagggcattgaatattaggcatgcgatatgcattgcacatgcattgaattta
attgtcaagaagtctttcgatgatgtgccaggcttaaatgagcttcgcaccaaatgtagg
aagcttgtaacctacttcaggaccagcacaacaggaaaagaaagactggcccaagtgcag
gtgcagatggggaggcctgctctgaaaatgattattgaggtggacactagatggaacagc
acttacagcatgctggaaaggctctatgacctgagagagccagtgggggcagctctagcc
tctttgaggacagatgtaagccctcctacttcattggagtatgaaacaatgaaggatgct
ctcgacctactggccccattccaccaggccacagtagagctttctgcagaaaaaagagtg
tctgcttcaaaggttattcccctaatgaagatgctgaaccacacaatagtaagaaaatcc
gagggcttaacatcaaatatggcaaggcagctggctgacaaccttgtccgtcgcgtcaga
gagcatgcgttacaaatggaatccattagtgtgatgacgatgcctacattgctggaccct
aggttaaaaaaactagggttcctaagtccagggaagctccaagaagccattacaagacta
aagtcagaatgtgccaatgttatcagaaattctgaaacaacacccccagctcaagtacct
gcctcacaagctgggccatctacaacctgtggtgacctttggcatctactggacagcaca
gtggataacagcagacggagctccagtgtgaccgcagatgctactattgaggtggaccgt
tatttgtcagagacaaatctggcaaggactgaggatccgctgggttattggaacaaacag
aagctccaacatcccaatttatataagctggcacttacgttcttatgttgtccggcatca
tcggtgccctgtgaaagggtgttttctaaggctggagaggtggtttccaaaaagagaaac
cgcctcaatccaaatactgtaaaaaaacttttgtttttaaataaaaatcagtaa
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