Rhinichthys klamathensis goyatoka (western speckled dace): 130072059
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Entry
130072059 CDS
T09701
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03460
Fanconi anemia pathway
rkg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130072059 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
130072059 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130072059 (fancl)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130072059 (fancl)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130072059 (fancl)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130072059 (fancl)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
130072059 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
130072059
NCBI-ProteinID:
XP_056092926
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MSCLLMRESPMIIALNKEKTVYDGFITVLEKDFRIRISLPPDHQMKQAKLHCCWQMKRLL
HGYQHIVKQRLQHSTNLMAFILELRTVLEVALKSQPGCQSFSPPQYYSQLITEMEILGWD
KLLFIDAEFRTLKMKAEDSAGRQHTITIKLKSKYPAEAPEFAADLPVPLVITWTSQSTLA
LVHSQFLINVEALSEFWSVLDEIDDQTWVLEPEKPTKADSMRRIAIGNNVSIKVQIDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSVLQNMKDVLEIEFPSPTTHEKSSFS
VECGICYSYRLESDIPDQVCNDPRCGQPFHQVCLYEWLRGLPTSRQSFNIVFGECPYCSK
PITVKTVTGNA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtttgctgatgagagaaagccctatgatcattgcgcttaataaggagaagaca
gtctatgacgggttcatcacagtgctggaaaaagacttcaggataagaatatctctaccc
cctgatcatcagatgaaacaggcaaaattacattgttgctggcaaatgaaacggctactt
catggttatcaacatattgtgaagcagagattacagcattcaactaatttgatggctttt
attctggaactcagaacagtattggaagtggcgttgaagagtcaaccaggatgccagtcc
ttctcaccacctcagtattattcccagctgataaccgagatggagatcttaggatgggat
aagctgctcttcatcgatgcagagttccgcacactcaagatgaaggcagaggactctgca
ggtcgtcagcacactattacaatcaagctcaagtctaagtatccagctgaggccccggag
tttgctgccgatcttcctgttccattggtcatcacgtggacctctcagagcaccttggcc
cttgtccacagtcagttcctgataaacgttgaggctctgtccgagttctggtcggttctg
gatgagatagatgaccagacgtgggtgttggaaccagaaaaacccacaaaagcagactcc
atgagaaggatcgccatcggaaacaatgtctcaataaaggtacaaattgaccccagacac
cccaaaatgctgccggagtgctgtttgctcggggctgagcacgttgtcactcctttacgg
aataaattgaatgccaatatgcatttatggaaccctgactgcagtgtcctacagaatatg
aaggatgtgttggagatagaatttccatcgcctaccacccacgaaaaatctagtttcagt
gttgaatgtggcatctgctactcttatcgacttgagtcagatattccagatcaggtctgc
aatgatccgcgctgtggccagcctttccatcaagtgtgtctttatgagtggctgagaggt
ctgcccaccagtcgccaaagcttcaatattgtgtttggagaatgtccttactgcagcaag
cccatcacagtgaaaacggtcacaggaaacgcttaa
DBGET
integrated database retrieval system
