Rhinichthys klamathensis goyatoka (western speckled dace): 130072105
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Entry
130072105 CDS
T09701
Symbol
pard3aa
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
rkg04517
IgSF CAM signaling
rkg04520
Adherens junction
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130072105 (pard3aa)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130072105 (pard3aa)
09144 Cellular community - eukaryotes
04520 Adherens junction
130072105 (pard3aa)
04530 Tight junction
130072105 (pard3aa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130072105 (pard3aa)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130072105 (pard3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130072105
NCBI-ProteinID:
XP_056093025
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKIHSLIQQATMRYKKAIAKDPGYWIQVHRLEHGDGGILD
LDDVLCDVADDKDRLVVVYEEQDPHHGGDGTSASSTGTQSPELFNTTELNSSNLSAFQPY
QTSSEIEVTPSALRTNMPLHVRRSSDPALVGLPEAQLQPEEPSRKNPTRWSTTAGFMKAN
TTSRTSSLERKAKDLEAYRSLPRDGVPWASQFQRENARSSLSANHPMVDQWLERQEQEEE
EDEERTDNGKNGRIEPVGRADSCVESASLDEMLKPVEVSNGGGPLGIHVVPFSGRDRRTL
GLLVKRLERGGKAERESLFQENDCIVRINNGDLRNIRFEQAQNLFTQAMRSPFILFHVVP
AVKKAQYELLSQNELGLQTGSGSGDRGSLLGGVVDYSPRRLSKADSTRSYPTLPHTANSS
NMSPTGPAQTSRPTSATSSVGYSKKIGRKFNVQLRKGPEGLGFSITSRDVPIGSSAPIYV
KNILPRGAAIQDGRLKAGDRLLEVNGVDLNGKTQEEVVALLRSTPMGGTVGLLIVRQEDA
FLPREVKEEQYDLILTPDGTREFLTFEIPLNDSGSAGLGVSVKGNRSKENHADLGIFVKS
IITGGAACKDGRLRVNDQLIAVNGESLLEKTNQEAMETLRKSMSVEGNKRGMIQLIVARR
LAGRGEESPSSPTVSLNSPRDEHERRISQSLYPGESLGDQHTPRHTMMGRLMGNFQLSPT
VNMPQDDTVIIEDDRPPVLPARLSDQSSSSSHEDMGFVTEMPESWPKDVQIQDESSLSPD
ADVDAQFQREGFARQSMSEKRTKQFDDASQLDIIKSRKSKSMDLVADEFNLTPRKERTEG
NSTRDVGPSLGLKKSSSLESLQTAVAEVTLNGDVPFHRPRPRIIRGRGCNESFRAAIDKS
YDKPGVTIVNPDEDDEGMETLEEDTEESSRSGRDSISTATDLTLPPSNTEKHMNGGRTKD
DKKERGGKDKKDKNKAKKGVLKGLGDMFRFGKNRKDERQGDKMERKGSSKSKMEETQATE
EEMQRMRLEQERIQAKTRELRERQARERDYAEILDFNRTFSSDEEHTYAGIGSLDSSLDS
SLDLSHNPGQERPQSPRDLPMPIEALYAQVNKPRNGRQPSTDSNRLAPSNHDRIHRLRQE
FQQAKHEEEPDDRRRSYSFQQQQRANTGSYTPTGRHSVSVEVQVQKQREDSFTQAQRQYN
SLPRQPRKNPSTVSQDSWDKVYPPGDVFQTTKENPRYSSYQGSRTANGYLGAASTGMNAR
VLLETQELLRQEQRRKEQEAKTKLPTMEETPAPIQTPVPTPPKGPYRQDVPPSPTQLARL
NRLQTPEKGRPFYS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacagtgtgttttgggaggacccgggtggtcgttccctgtggggatgggaat
atcaaaatacacagtcttattcagcaagcgacaatgagatataaaaaagccatagccaag
gacccaggctactggatacaggtccatcggttagaacatggagacggggggattttggac
ctggatgacgtgctgtgtgatgtagccgacgacaaagaccggctggtggtggtgtatgag
gagcaggatcctcatcatggaggtgacggcaccagcgccagctccacgggaacccagagt
cccgaactcttcaacacgactgagctcaactccagcaacctgtccgccttccagccctac
cagaccagcagcgagatcgaggtcacgccatcagccctcaggaccaacatgcccttgcat
gtacggcgtagcagtgatccagccctggttggtcttcccgaagcccagcttcagccagag
gaaccgtctcgtaagaatcccacacgctggtccaccacggcagggtttatgaaagccaac
accaccagcagaaccagtagtctagagcgaaaggctaaggatctggaagcgtaccgcagc
ctgcctcgggatggcgtcccctgggcgtctcagtttcagagggaaaacgcccgctcctcc
ctcagtgccaaccatcccatggtggaccagtggcttgagcgccaagaacaggaagaagaa
gaagacgaggagagaacagacaacgggaagaacggaaggatagaaccggtgggacgggca
gattcctgtgttgaatccgcttcactcgatgaaatgttaaagccggttgaggtgtccaat
ggcggcgggcccctaggaatccacgtggtgcctttcagtggcagagacagaaggactctg
ggtttgttagtgaagaggttggagagaggcggaaaggcggagcgggaatctctgttccag
gagaacgactgtatcgtcaggattaataacggagacctccgcaacatccgatttgaacag
gcccagaatttgttcacacaggcgatgcgttctccattcatcctgttccatgtagttcca
gcggtgaagaaagcccagtacgagctgctgtctcagaacgaactgggccttcagactggt
tctggttctggagacagaggtagtctgttaggaggagtcgtggactacagcccgcggaga
ctgtccaaagcggattcgacccggagctatcccacgctaccacacacagcgaactcttcc
aacatgagcccgacaggcccggcccaaacctccaggcccaccagcgccacttcctctgtg
ggatactccaaaaagatcggccgcaagttcaacgtccagctgaggaaaggtccggagggc
ttgggttttagcatcacctccagagacgtgcccatcggcagttcggcccccatatatgtg
aagaatatcctcccccgtggagccgccatccaggacgggcgtctgaaagctggagaccgg
ctgctcgaggtgaatggagtggatctgaatggtaagactcaggaggaggtcgtggctctg
ttgcgctcgactcccatgggaggcactgtaggtcttctcatcgtcagacaagaggacgct
ttcctgccccgcgaagtgaaagaagaacaatatgatttaatattgactccggatggaacg
agagagtttttgacctttgaaatccccctgaatgactcgggctcggcagggttaggggtc
agcgtcaagggcaacagatctaaagagaaccacgctgacctgggcatattcgtcaagtct
ataatcactggaggagccgcttgcaaggatgggcggctgagggtaaatgaccagctgata
gcagttaatggagagtctctactggaaaagaccaatcaggaagccatggagaccctccgc
aagtccatgtccgtcgagggcaacaagagaggcatgattcagctgatcgttgcccgacgg
ctcgcagggagaggagaggagtctccgagtagcccgactgtgtctctgaactctccacga
gatgaacatgagcggcggatctcccagtcgctgtatcccggagagagcctgggagaccag
cacaccccacgacacaccatgatggggagattgatgggtaacttccagctgtcccccact
gtgaatatgccccaggatgacaccgtcatcattgaagatgataggccacctgttcttcct
gcccgcttgtctgaccaatcatcatcgagctcccacgaagacatggggtttgtgacagaa
atgccagaatcctggcccaaagatgtccagatacaggatgaaagctctctcagtccagac
gcagacgtggatgcccagttccagagggaaggcttcgcccggcagagcatgtccgaaaag
aggaccaaacagttcgacgacgcttctcaactggacattatcaagagccgcaagtccaag
agtatggacctagtagccgacgagtttaacctcactccccgcaaagagaggaccgaaggc
aactccacgcgagatgtgggaccgtcgttaggtttgaagaagtccagttccttggagagc
ctccagacagctgttgcagaggtgacgctcaacggggacgtcccgttccacaggcctcgt
cccaggatcatcaggggaaggggttgcaacgagagcttcagggcggccatcgacaaatca
tacgacaagccaggtgtgaccatagtcaaccccgatgaagatgacgaaggtatggagacg
ttggaagaagatacagaggaaagctctcggtctggccgtgactccatttccactgccaca
gacctcaccctcccaccctccaacacagagaaacacatgaatggaggacgcaccaaagat
gacaagaaggagcgtggagggaaggacaagaaagacaagaacaaagccaagaaaggcgtg
ctgaagggcctgggcgacatgttcaggtttggcaaaaaccgcaaagacgagaggcaagga
gacaagatggagcggaaggggtccagcaagagcaagatggaggaaactcaggccactgaa
gaggagatgcagagaatgaggctagaacaggagagaattcaagctaagacgagggagctc
agagagcgacaggccagagagcgagactacgccgagatcctggacttcaaccgaaccttc
agctcagacgaggagcacacgtacgctgggatcggctctctggactcgtctctggacagc
agtctggatctgagccataaccccgggcaggagcgtcctcagagtcctcgggacctgccc
atgcccatagaggcgctttacgcacaggtcaacaagccccgcaacggacgccaaccctcc
acagacagcaacagactggcacctagcaaccatgaccggatacatcggctacggcaagag
ttccagcaggccaagcatgaggaggaacctgatgaccgccgtcgatcctacagctttcaa
cagcaacagagggccaacacaggttcttacacaccgacggggcggcattcggtttctgtg
gaggtgcaagtgcagaaacagagagaggactcttttactcaagcccagaggcaatacaac
tccttaccgcgacaaccacgtaaaaaccctagcaccgtgtctcaagactcttgggataaa
gtctatcctcccggcgatgtctttcagaccaccaaagaaaacccgcgctactccagctac
cagggatcccgcactgccaacggctacctgggcgccgcctccacaggcatgaacgcccgc
gtactcctggagacccaagagctcctgagacaggaacagagacgaaaggagcaagaggcg
aaaaccaagctgcctacgatggaggaaacaccagccccaatccaaaccccggtccctaca
ccacccaaaggtccctaccgacaagatgtgccaccatcgcccacccaactcgcccggctc
aaccgtctacagacccctgagaagggccgtcccttctactcttga
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