Rhinichthys klamathensis goyatoka (western speckled dace): 130072129
Help
Entry
130072129 CDS
T09701
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130072129 (ddx10)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130072129 (ddx10)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
90S particles
Helicases
130072129 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
130072129
NCBI-ProteinID:
XP_056093056
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MREKNNKEKKKVTDDPVKNFEKWKKKYDKTKTRVKRAQQTTRKKRDWEVERENIQRLVNK
YSEINSKEAVKFSDFPLSKKTLKGLLVAQYRQPTEIQRQTIGFALRGKDVLGAAKTGSGK
TLAFLIPVLECLYREQWTADDGLGALIISPTRELAYQTFEVLRKIGKNHEFSAGLIIGGK
DLKGESEKIHRTNIIICTPGRLLQHMDETSTFHASNLHMLVLDEADRILDMGFADTLNAI
VENLPKTRQTLLFSATQTRSVKDLARLSLKDPEYVSVHEQAKFSTPATLEQNYVVCELHQ
KINMLFSFLRSHLQKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYN
DFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRAARYKEEGEALLVL
LPSEEKGMIAQLQEKKVPINKIQVNPEKLVSVQQKLEAFLAQEMDQKERAQRCFVSYLRS
VYLMKNKDVFDVFQLKLPEYAMSMGLAVAPRVRFLSKTQQQKSGGAQDDSGAAGHESEDE
LQSFKAKLEGQQAESQSSQSEEEEEEEEEETLKPAALLCGFNEEEEDDDLDLLTVKRKDV
FNTNEESQDDEGSDANSKNNKQRESKFKDAKKIHKRNLKVNTKKIFTEEGKEVQQWPPLQ
RTMVPDEEEDEEISGINVEAAKERLRREDQEFDKIEYRRKIQEKHREKRLKEKAARREAN
KQQKEEKNKAAAAPDDDDEDEDEEVVAYLSGADEEFDPSSLPDPDKVCESESSSKEDGDS
SDHGGRKRSFSSDSSEDDDGDVEVQQTQVGRKKPRKESTAAPLDTGLSLAEDEELVLHLL
GSRS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagaaaaataacaaagagaagaaaaaggtaaccgatgaccctgtaaagaatttt
gagaaatggaaaaagaaatacgataaaacgaaaaccagagtcaaacgagctcaacagacc
actaggaagaaacgcgactgggaggtggagagagaaaatatacagagactggtgaataaa
tactcggagatcaattccaaagaggctgttaagttctctgattttccactctcaaaaaag
actctgaaaggtcttcttgtggctcagtacaggcagcccacagagattcagaggcagact
attggatttgctttgcgaggtaaagatgtccttggtgctgcaaagacgggctctggaaag
actttggccttcctcatcccggttttggagtgcttgtatcgtgaacagtggactgcggat
gacggcctcggcgctctcatcatctctcccacccgagagctggcctatcagacctttgag
gtgttgaggaagatcggcaagaaccatgaattttctgccggccttataattggtggaaag
gatctgaaaggtgaatcagagaagatccatcgcacaaatatcattatctgcaccccagga
cgtctgctgcagcacatggacgagacgtccacctttcatgcttcaaatctacacatgctt
gtacttgatgaagccgacaggattctagacatgggtttcgctgacacactcaatgccatt
gttgaaaacctcccgaaaacacgacagacccttctcttctccgccactcagaccaggtct
gtcaaagatctggccagactgagcctgaaggacccagagtatgtgtcggtccatgagcag
gccaagttcagtactcctgcaactctggaacagaactatgtggtgtgtgagctgcaccag
aaaatcaacatgctcttctcatttttgaggagtcaccttcagaagaagatcatagtcttc
tttgcctgttgcaaagaggttcagtatctgttccgggtcttctgccggttacgtcctggt
atctccgtacttgctttgcatgggaaacagcagcagatgaaaagggtggaggtttacaat
gactttgtccgcaagacctctgcagtcctttttgccacagatatcgctgccagaggactt
gacttccctgctgtgaactgggtgcttcagtttgactgtcctgaagatgcaaacacatac
attcacagagttggcagagctgccaggtataaggaggaaggtgaggcgcttctggtcctt
ttgccctcggaggaaaaaggcatgattgcacagcttcaagagaaaaaagttcccattaac
aaaatccaagtgaacccagagaagttggtgtcagttcagcagaagttggaagccttcctg
gcgcaggagatggaccaaaaggagcgggcgcagaggtgttttgtgtcctacctccgctca
gtctatctgatgaagaacaaagatgtctttgatgttttccagctcaaactcccagaatat
gccatgtcaatgggtttggcagtggcaccacgggtccggttcctcagtaagacccagcag
caaaagagcggaggtgcgcaggacgacagcggtgctgcaggacacgagtctgaagatgag
ctgcagagcttcaaagccaaactcgaaggacaacaagctgagtctcagtcctcacagtct
gaggaggaagaagaagaagaagaggaggagacattaaagcctgcagctctgctatgtggc
tttaatgaagaagaggaggacgacgatctggacctgctgactgtcaaacgtaaagacgtg
ttcaataccaatgaagaaagccaagacgatgagggctcagatgctaattccaagaataac
aaacaaagggagtccaaattcaaagatgcaaagaaaatacataaaagaaacttaaaggtc
aacactaagaagatcttcactgaagagggaaaggaggtgcagcagtggcctccgctgcaa
aggaccatggtaccagatgaagaggaggacgaagagatatctggcattaacgtggaagca
gccaaagagcgactccgcagagaagaccaggagtttgacaagatcgagtaccgccgtaaa
atccaggagaaacacagggagaaaagactgaaggagaaagcagctcggagggaagcgaac
aaacagcaaaaagaggagaaaaacaaagcagctgctgctcctgatgacgatgatgaggat
gaggatgaagaggtggtagcatacctgtcgggtgctgatgaagaatttgatcccagcagc
cttcctgaccctgacaaagtgtgtgaatcggagtcctcctccaaggaagatggtgattca
tcagaccatggtggcaggaagagaagtttcagcagcgacagcagtgaggatgatgatggt
gatgttgaagtacagcagacacaggtgggcagaaagaagcccaggaaggagtccacagca
gctcctctggacactggcctgtcgctggccgaagacgaggagcttgtgttacatttattg
ggcagtcgcagctag
DBGET
integrated database retrieval system
