Rhinichthys klamathensis goyatoka (western speckled dace): 130072145
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Entry
130072145 CDS
T09701
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03030
DNA replication
rkg03410
Base excision repair
rkg03420
Nucleotide excision repair
rkg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130072145 (rfc2)
03410 Base excision repair
130072145 (rfc2)
03420 Nucleotide excision repair
130072145 (rfc2)
03430 Mismatch repair
130072145 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130072145 (rfc2)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130072145 (rfc2)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130072145 (rfc2)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130072145 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
130072145 (rfc2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130072145 (rfc2)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130072145 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
130072145 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_18
MipZ
DNAX_ATPase_lid
ABC_tran
AAA_28
AAA_5
AAA_23
AAA_25
AAA_30
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130072145
NCBI-ProteinID:
XP_056093077
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MDVEMKETDSEQSQVDGQPKKDDTAPKTSTTAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKVIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagatgaaagagacagacagtgaacaaagtcaagtcgacggacagcctaaa
aaggatgatactgcaccgaaaacatcaacgactgcttatgaactaccatgggtagagaaa
tacagacccctgaagttgaatgaaatagttggaaatgaggaaactgtcagcagactggag
gtgtttgcaagagaaggaaatgtgcccaacatcatcattgctggtcctcctggtactgga
aaaactaccagcattttgtgtttggctagagctcttcttggcccgaccatgaaagatgct
gttcttgagctgaatgcctcaaatgaccgaggtattgatgttgtaagaaacaagattaaa
atgtttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggat
gaggctgacagcatgacagatggagctcagcaggctctcagaagaaccatggagatttac
tctaaaaccacacgctttgctctggcatgtaatgcatcagataagatcatagagcccatc
cagtcccgctgcgctgttctgcgttacagcaaactccgagacgaccagatcatgatgcgt
ctcacggaggtggtagagaaggagaacttgcatgtcaccaacgacggccttgaggccatt
atcttcaccgctcaaggggacatgagacaggctctgaataacttgcagtcaacaaattct
ggatttggttacatcaacagtgaaaatgtgttcaaggtgtgtgacgagcctcatcctctg
ctggttaaaagcatgctagaacactgcgtcaacgccaacattgatgaagcctacaaggtt
attgagcagctttggtcactaggatactcaccggaggacataatcggaaacatctttaga
gtgtgtaagacctttcagatggcagaatatttgaagctggaatatattaaggaaattggc
tacacgcatatgaaagtggcagaaggggtgaactctctgttacagatggctggtctgttg
ggtcgactgtgcagtaagacggctgcgcctgatgcaagctaa
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integrated database retrieval system
