Rhinichthys klamathensis goyatoka (western speckled dace): 130072159
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Entry
130072159 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130072159
04121 Ubiquitin system [BR:
rkg04121
]
130072159
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130072159
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130072159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
130072159
NCBI-ProteinID:
XP_056093100
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All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEPSQRAGNETELLHTPVGVKSWVWKHFGFRKTDGGAVVRDVAVCKEKGCQSEIRYCGNT
SNLSAHLKRRHGIDDGESECNVKERTQASTPAKSLATFFAPKLSSTSKRAKNITKGIAFF
ICKDMRPYSVVENEGFRYLLEVLEPRYNIPSRQHFSESYIPNLYTKVCDEVIQGLMSAER
VAITSDGWTSCTTESYITVTCHFIDNKWQMKNHVLQTRVLGDTHSGVNIGQVLRSACEEW
GILDKAPALVTDNASNMIKAGEEAGLSPHIKCFAHTLNLTTQDGLKIAATERLLGRVRRI
VSFFHRSAVATTVLKEKQGLLGLPHHKLKADVKTRWNSSFEMLERFLEQQAAVMATLLDK
KVRKGSCDVHTLSESDLLAAEQMVSLLAPLKSATTLMCEEKQPTVSIIAPLRIKLLAHFE
YVPDDSALIKDMKRLMSEDLRGRYVDEEPFLLRAAALDPRFKKLPFLGDERRNQTFEYLA
EEAAQLKEQRSEAQPEEAPEAQPPHSSPHQISLELNEVCDAETTKECPPVSKKSKVLEDL
FGDSFCTEDPSVRGKTSKEQAHDEVRKYRDVASLSLDGKVLDWWRAHQAEFPLLADLAKT
YLCIPVHLLQRMCDHYL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatcacagcgagctggcaatgaaactgaattgttacacactccagtcggcgtc
aagtcatgggtgtggaagcattttggcttcaggaaaaccgatggaggagcagtggtaaga
gatgttgccgtttgcaaagagaaaggctgtcagtctgagataagatactgtggcaatacg
tcgaatctatccgcacacctgaaaaggcgccatggcattgatgatggcgagtcagagtgt
aacgttaaagaaagaacacaggcttccacgcccgccaaatcactggcaacgttttttgct
ccaaagttgtcgagcacttcaaaaagagcaaaaaacatcaccaaaggcattgcgtttttt
atatgcaaagacatgaggccctatagcgtcgtagagaacgaaggctttagatacctgctt
gaagttcttgagccgaggtacaacatcccctcacggcaacactttagcgagtcctatatt
ccgaacttgtacaccaaagtttgtgatgaagttattcagggtctgatgagtgcagagcga
gtagctataacttcagatggatggacttcatgcacaacggagtcctatatcactgtaacg
tgtcatttcattgacaacaaatggcaaatgaaaaaccacgttttacagactcgtgttttg
ggagacactcattcaggagttaatatcgggcaggttctgagaagcgcgtgtgaagaatgg
ggtatattggacaaggcaccggctctcgtaaccgacaacgcttctaacatgatcaaagct
ggtgaagaggcaggcttatcaccacatataaagtgcttcgcgcacacgcttaatctgaca
acacaagatggcctgaagattgctgccacagaacggcttttagggcgcgtgaggagaatt
gtgagtttttttcaccgcagcgcagttgcgaccactgttttgaaggagaagcaaggtttg
ctcgggcttccacaccacaagctcaaagcagacgtgaaaacccgatggaatagttctttc
gagatgttggagcgatttcttgaacaacaagctgcggtgatggcaacacttctcgacaag
aaagtcagaaaaggctcgtgtgacgtgcacacactcagtgaaagtgatctcttggctgcc
gaacaaatggtgagtctgctagccccgctaaagtctgctaccactctgatgtgcgaggag
aagcaacccactgtgtccatcatcgcacctctccgaataaagttgttggcgcatttcgaa
tatgtaccggatgactccgccttaatcaaagacatgaaacgactcatgtctgaagatctt
agagggcgatatgtggacgaagaaccattcttacttcgagcagctgctttggacccccga
tttaaaaagcttcctttcctgggtgatgagagaagaaaccaaacctttgaatatcttgcg
gaagaagcggcacagctgaaggaacagaggtcagaggcccagcctgaggaagccccagag
gcccagcctcctcactcttctcctcaccagatttctttggagctaaatgaggtgtgtgat
gcagaaaccactaaagaatgcccccccgtttccaagaaatcaaaggtattggaggacctt
tttggtgactccttctgcactgaggacccaagtgtcagaggcaaaacatccaaagaacaa
gcccatgatgaagttaggaagtacagagatgttgcatctttgagcctagatggtaaggtg
ttagactggtggagagctcaccaggctgagtttcctctcctggcagacctggccaagacg
tacttatgcattcctgttcatctactgcagaggatgtgtgaccattacctctaa
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