Rhinichthys klamathensis goyatoka (western speckled dace): 130072171
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Entry
130072171 CDS
T09701
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130072171 (sall3a)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130072171 (sall3a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130072171 (sall3a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130072171 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
IZUMO
TDBD
zf-C2H2_11
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
130072171
NCBI-ProteinID:
XP_056093111
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MSRRKQAKPQHLRSDEEPGSVPLPGHVSGEGVEDSDSGNESRSGSEETHVCEKCCAEFFK
WSDFCEHLNTCTKNPLVLIISDNEVTSDPAQDYVPEPSPVPSSEPAESEDDPGGSLIPHA
EADEGADMMLDPGAVLEKEDEPMEVELSPEKPTDSEDQVTLAEPDISLPQLEDHTQSSGA
GYSIPSTNVTLETLHGTRVAVAQFSQGARGALAGEVSTMAIPMILDQLMALQQQQLHQLQ
LIEQIRSQVALINKQAPTQTTVNHQVDHSMNAALQVTSSSSIPTMSGQLHLRGFITPPVH
QLPIKGPSSLNGQVSASLSSALEGACSSVPQTGGQLASSGMKSNITMNSLYPTTSNVVPS
QMPPCSVSISSSGCTSSSTGTGGEVSCCISLPRNTPSPLTLTHGRLLTSPSSLPLVPHSS
PNSVIFPNPLASIAATTNALDPLSALMKHRKGKPPNVSVFDTKPSSEDPFFKHKCRFCAK
VFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEY
LDNVPTSSGIPYGMSFPPEKPVTTWLDSKPVLSTIPSSVALQLPPTIPSILGNYGDSTSF
TPLSRSPQRPSPPSSECTSLSPNHLIAEASIAQISSSPQPNVASDTPPVLKPEAFRLPPN
SPTRPGETSISITSMPQVISTTTVTTTTRTQITDSTNTPSAVSHPSLQMMSSQFKPKFPF
GGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGERPFKC
KICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNT
PLPESFQDMDTDLSFDEKSLDAMSNYDDELLDEMDQVTEDETCLKEGNVNSPKQLNLYSD
MSPSTSPPTSLISSIVALENEMKLSDPTVNVTHSFSHKPPENGSEIDGENGDMFKNDSSS
TMGDLENQSVGSPAQSESSGSMQALSPTYSQPESHRFEPSRVESPPQANSSKDEALHAAS
ASATVKSEQSDTPSPGAENTGALDLTATQPNRPFVKDENHFSLLFLGRDRGLNTPSIMSS
ESSTVKYENGHSKPPALCEGPHLPVGPQVPTATPHTTLSPNLAPMLAPPPPRRTPKQHNC
HSCGKNFSSASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRR
LSVENPMALLGGDAIKFSEMFQKDLTARAINVDPGFWNQYAVAITNGLAMKNNEISVIQN
GGIPPIPISLSGGGIPAVGGLSGGMERSHTGSSSPGNTLDKTSLEVGAGHPFSRFREKDK
EIGIN
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcggaagcaagcgaagccccagcacctgcggtcggacgaggagcccgggtcg
gtcccgctgccgggtcacgtctccggtgaaggagtggaggattcagacagtggaaatgag
agccgcagtgggagcgaagagacccatgtgtgtgaaaagtgttgcgctgagttctttaag
tggtcggatttctgtgaacatctgaatacctgtaccaagaacccgcttgtgttgattatc
agtgataatgaggtgacttcagacccagcccaggactacgtgcctgagccatccccggtg
cccagcagcgagccggccgagagcgaggacgatcccgggggaagcctcatcccacacgct
gaagccgatgaaggagcagacatgatgctggatccaggggctgtcctggagaaagaagac
gagcccatggaagtggaactgtctcctgagaaacccacagattctgaagatcaagttaca
ctggcagagccagacataagcctacctcagcttgaggaccacacgcagtcctccggggcg
gggtactctattcccagcactaacgtcacgctggaaaccctgcatgggacccgtgtggcg
gtggcccagttctctcagggtgcccgaggagctctagctggtgaagtgtccactatggcc
atccccatgatcctggaccagctcatggccttgcagcagcaacagctccatcagcttcaa
ctcatagagcagattcggagccaggtggcgctaataaacaaacaagcccccacacagacc
actgtcaaccatcaagtagaccacagcatgaatgctgccttacaagtaacctcatcctcc
agcatacccactatgtctgggcagcttcatttacgtggcttcattacaccccctgtgcat
cagcttcctatcaagggaccctccagtttaaacggacaggtctcagcctcattatcttca
gctctggagggagcctgttccagtgtccctcagacaggtggccaactggcgagttctggg
atgaaaagcaatatcacaatgaattccttgtatccaacaaccagtaatgtggttccctct
caaatgccaccatgctcagtgtcgattagcagcagtggctgcactagtagtagcacggga
actgggggcgaagtcagttgttgtatttcactaccaaggaacacacctagtcctttaacg
ctgactcatgggagattgctaacatccccctccagccttccccttgtacctcacagctcg
cccaacagtgttatcttccctaatcctcttgccagtattgcagcaacaacaaatgctctt
gatcctctttccgccctaatgaagcaccgcaaaggaaagcccccaaatgtctctgtgttt
gacaccaaacccagttcagaagatcccttcttcaaacacaagtgcagattttgtgctaag
gtgtttggaagtgacagtgccctgcaaattcaccttcgttcccatactggtgaaaggcct
ttcaaatgcaacatttgtggtaatcgcttctctacaaagggtaacttaaaggttcatttt
cagagacacaaagaaaagtatcctcacatccaaatgaacccctatcctgttcctgagtat
ttggacaatgttccaactagctcaggtataccttatgggatgtcctttcccccagaaaaa
cctgttaccacatggctggacagcaaacctgttctgtctacaatcccatcatcggtagca
ctgcaactccctccaactatacccagtattctaggaaactatggggattcaactagtttc
acccctttaagtcggtcacctcaaaggccatcaccgccatcaagtgagtgcacatctttg
tctcctaatcacctcattgctgaggccagtattgcacaaatctccagttcaccacaacct
aatgtggcgagtgacacgcctccagttctcaagcctgaagcctttcgtctaccacccaac
tcccccaccaggcctggagaaaccagcatatcgattacttccatgccccaagtgatttcg
acgaccacagttacaaccacaaccaggacacagatcacagactcaacgaatactccgtct
gctgtctctcatccctcactacaaatgatgtccagtcagtttaagcccaagtttcctttt
ggtggcctcctggactctatgcaaacatcagagacctcaaaactacagcaactggtggaa
aatattgataagaagatgacagaccccaaccaatgtgttatctgtcatcgtgtgctcagt
tgtcagagtgccctgaagatgcactatcgcatccatacaggagaaagaccctttaaatgt
aaaatatgtggtcgtgctttcacaaccaagggtaatttgaaaacacactttggggttcac
aggtcaaagccccctctccgggtacagcactcttgccccatatgccagaaaaagtttact
aatgccgtagttttgcagcaacacatccgcatgcatatgggtggacagattcccaacaca
cccctgcctgagagttttcaggacatggacacagatctctcctttgatgaaaagagctta
gacgccatgagcaactatgatgatgagctacttgacgagatggaccaagtaacggaagat
gaaacatgtctcaaagaagggaatgtgaactcaccaaaacaactcaatttatactcagat
atgtctccaagcacctctcccccaacctctctcatctctagcattgttgctttggagaat
gaaatgaagctgagtgacccaacagttaacgtaacccattccttcagccataagcctcca
gaaaacgggagtgaaattgatggggaaaatggagacatgtttaagaatgactcatcttcc
actatgggagacttggagaaccagagtgttgggagtccagcacagtctgaatcctctggc
tctatgcaggctctgtctcctacctacagccagccggagagccatcgcttcgagccatct
agagtcgagtcccctcctcaggcaaatagtagcaaggacgaggctctgcatgctgcttca
gcgagtgcaacggtgaagtctgagcagtcagacaccccttctcctggagcggagaacaca
ggcgcattagatctcactgccacacagcccaacaggccattcgtcaaagatgagaatcac
ttcagtctgctgttcctgggaagagacagaggtttaaacactccgagtattatgagctca
gaatcaagcacagtgaaatatgagaatggacacagcaaaccaccggccttgtgtgaggga
ccccacttaccagttggcccccaggttcctaccgcaacccctcacacaacattaagcccc
aacctggctccgatgctggctccgcccccaccccggcggacccccaaacaacacaactgc
cactcctgtgggaagaacttctcgtccgccagcgctcttcagatccacgagcgcactcac
actggagaaaagcccttcggctgctccatctgtggcagagccttcaccacaaagggaaat
ctgaaggtccacatgggaacccacatgtggaacaacgccccggcccggcgggggagacgg
ctctccgtggagaacccaatggctcttctagggggagatgccataaagttcagcgagatg
tttcagaaggacctcaccgctcgagcaatcaacgtagacccgggcttctggaatcagtat
gctgtagccatcaccaatggcctggcaatgaaaaacaatgagatctctgtcattcagaat
ggaggcattcctccgattcccattagcctgagtggcggaggcattcctgctgtgggaggc
ctgtccggcgggatggagaggtctcacactgggagcagttctcccgggaacacactcgac
aagaccagcctggaagtgggagccggacaccccttctccagattcagggaaaaggacaaa
gaaattgggattaattga
DBGET
integrated database retrieval system
