Rhinichthys klamathensis goyatoka (western speckled dace): 130072279
Help
Entry
130072279 CDS
T09701
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130072279 (cbll1)
04131 Membrane trafficking [BR:
rkg04131
]
130072279 (cbll1)
04121 Ubiquitin system [BR:
rkg04121
]
130072279 (cbll1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130072279 (cbll1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130072279 (cbll1)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130072279 (cbll1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130072279 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
AraC_N
Motif
Other DBs
NCBI-GeneID:
130072279
NCBI-ProteinID:
XP_056093278
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MDHSDNDMQGTDGPLGGPDVRRRIPIKLLPKQARNKPAPRPQRPAGRLPPKAHSGEEEGF
NFKKEDRFDCGVKAGDAFATQRRFPQQLYWDYKLNLIGEKDETPVHFCDKCGLPIKTYGR
MIPCKHVFCYECALHHERKGDKMCPGLNMYSCTDPVQRIEQCQRGSLHMCSIVQGCKRTY
LSQRDLQAHINHRHMRSGKSSSSRSDPLHLPPASEVSDRFRVPPPHLPKPHVLIPPPLAH
QGHDPYSQPPSSSHDDHRPPQGQPPGDMGPSRSLSQETFRISTVTTRKHSNLITVPIQDD
SASSGPSRDTLPQPGNAPPPHHHPGDYPGQPVVTHPHHMMAPPQQHYGPPPPPPPINHPM
PHPGQGSNTPHMVFNQAPPPLSSVPPPITPPPGHLIGQMPPFMNHPPPGPPPQHGGPPVN
APPPHHYNPQFPEDKSTLSPPFNQPGGMSPGMWPAPRGPPPRMQGPPPQGQMPGPHHPDQ
GRYRPYYQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaccacagtgacaatgatatgcagggtacagatgggccgttaggtggtcctgatgtc
aggaggaggatcccaatcaaacttcttcccaaacaggccaggaataaacctgccccacga
ccgcagagaccagcgggacggttaccacccaaagcccattctggagaagaagaagggttt
aacttcaagaaggaagaccgatttgattgtggtgtgaaagcaggagacgcatttgcaact
cagcgtcggttcccacagcagctgtactgggattacaagctaaacttgatcggtgaaaag
gatgagacacccgtccatttttgtgacaaatgtggactgccaattaaaacatatggccgt
atgatcccatgtaagcatgttttctgctacgagtgtgcattgcatcatgaaaggaagggt
gataagatgtgtccaggtctgaacatgtacagctgtacagacccggtccagcggattgaa
cagtgccagcgtggctccctccacatgtgtagtatcgttcaggggtgcaaacgcacctat
ctgtcccagagggacctgcaggcccacatcaaccaccgacacatgcggtccggcaagagc
tctagcagccgctctgaccctctccaccttcctccagcctcggaggtgtccgaccgcttc
cgcgtgcctccgcctcacctgcccaagcctcatgtgctcatccctcctcctctggctcat
caaggtcacgacccctacagccaacctccctcttcctcccacgatgaccaccgacctccg
caaggccaaccgccgggagacatggggccatcccgctctctctctcaggagaccttccgc
atctcgaccgtcaccacgcgaaagcacagcaacctcatcacggttcccatccaggacgat
tctgcgagctccggaccatcacgtgacacacttccccagcctggcaatgctccaccccct
caccatcaccccggagactatccaggtcagcccgtcgtgacccatccgcatcacatgatg
gcgccacctcagcagcactacggaccccctccgccccctccccccatcaatcaccccatg
ccgcacccgggacagggctctaacacacctcacatggttttcaaccaggcccctccgcca
ctgtcgtctgtccccccacccattaccccgcctcccggacacctcattggtcagatgccc
ccgtttatgaaccatcctccacccgggccaccccctcaacacggtggaccccctgtcaac
gccccgccaccccatcattacaacccacagtttcctgaggacaagagcacactcagcccg
ccgtttaaccagccggggggcatgagtccaggaatgtggccggcccccaggggtcctcct
ccccgaatgcagggtccccctccacagggacagatgccggggccgcatcacccggatcag
ggccgctacagaccatattaccagtaa
DBGET
integrated database retrieval system
