Rhinichthys klamathensis goyatoka (western speckled dace): 130072288
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Entry
130072288 CDS
T09701
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04260
Cardiac muscle contraction
rkg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130072288 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130072288 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
130072288 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130072288 (cacna2d4a)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130072288 (cacna2d4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA
VWA_2
dCache_1
MCP-like_PDC_1
Zn_ribbon_5
SusF_N
Motif
Other DBs
NCBI-GeneID:
130072288
NCBI-ProteinID:
XP_056093287
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MGRMKGITLFWVLFSSWTIQTQAQMRISPETVQQWASAFGKQIRALSNRYSGAQLLQKKY
KDVEPIIKMVEVDGIKMVKEFAEEMENMLGRKMKSVKRMAEIAEDADLYHEYNATLEFDY
YNSMMINKVNEDGNNVELGGEFPLEENEHFNKLPVNTQQSVIQVPTNVYNKDPDILNGVF
MSEALNDVFISNFEKDPTLTWQYFGSSSGFFRLYPGIQWTPDENGVVTFDGRNRNWYIQA
ATSPKDIIIAVDISGSMKGLRLTIAKHTINTILDTLGENDFVNVIAYSDYVRYVEPCFKG
TLVQADLDNREHFKLLVEELQVKGEGKVKKAMKESFKILNEAAAEGRGSLCNQAIMLITD
GAMEDFQKVFEEFNWPDRKVRVFSYLIGRELTFADNVKWIACNNKGYYTHISTLADVQEN
VMEYLHVLSRPMVINHDHDIIWTEAYMDSVLFNTQAESLLLMTSVAMPVFSKKEETLSHG
ILLGVVGTDVPLKELMRLAPRYKLGVHGYAFLNTNNGYILSHPDLRPLYKDGKKLRPKPN
YNSVDLSEVEWEDTEYALRTAMVRGESGTISLDVRATVDKGKRVVFLKNEYFYTIINETP
FSLGIVLTNGHGKNVFIGNVSVEEGLHDLTASDVTIANEWTYCETDIDPHHRKLTQFQAV
VRYLLGKEPDLECDERLLQQTLFDAVITAPMEAYWTALLLNASGIDAGVETAFLGTRSGL
MRMTRYVGEEKRVGKKFLTPSDKENIFTLDHFPVWYRRAAENPAGSFLYYVPTEDNTGVD
GRVVIAVTSVTVTVNKKTAIAGAIGVQVSLEMLEKRLWSVATQANDKDCSGVEGLCPLSC
TDNDINCYVIDSNGFIIISKDRTDVGRFLGEIDGSVMSQLLRMGMFKRVLLYDYQGMCKA
NTHSASGARPLLSPFYNLLAALRWFLSNFLLFLLDFNIYGLWHSDHFVEAKTLFHSSGKK
SKGGILQPCDTEYPSFVYEPSIKETNSLIKCGRCQKVFVINQIPDSNLLLVVIQADCDCS
RQYAPITMEPKEVKYILKNPAKSGSPDHTLRR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggatgaagggcatcacactgttttgggtgctgttttcaagttggaccatccaa
acacaagctcagatgaggatatcgcctgaaacggttcaacagtgggccagtgcctttgga
aaacagattcgggccttgtcaaacagatactcaggtgcccaactcttacagaagaaatat
aaagatgtggagcccattatcaagatggtggaagtggatggtataaagatggtgaaggaa
tttgctgaagaaatggagaacatgctgggcaggaagatgaagtcggtcaagagaatggca
gagatagcagaggatgcagatttatatcatgaatataatgccacattagagtttgactac
tacaactccatgatgattaacaaagtaaacgaggatgggaacaatgtggagctggggggt
gaatttcctctggaggagaatgaacacttcaacaaactgcctgtcaatactcagcaaagt
gtcatacaagtgcccaccaatgtctataacaaagatcctgatattctgaacggagtgttt
atgtcagaagcactgaatgacgtatttatcagtaactttgagaaggacccgactctaacc
tggcaatacttcggcagttcatcgggatttttcagactttaccctggtatccagtggaca
cctgatgaaaatggagttgtcacttttgatggcaggaatcgcaactggtacatccaggca
gccacgtcccccaaagacatcatcatcgctgtggacatcagcggcagcatgaagggtctg
aggctcactattgcaaaacacaccatcaacaccattctagacacactcggcgaaaacgac
tttgtcaacgtcattgcgtacagtgattatgtccggtatgtagagccctgttttaaaggc
acgctggtacaggccgacctggataaccgcgagcacttcaaacttttggtggaggaattg
caggtaaaaggtgaaggaaaggtgaagaaagccatgaaagagtcctttaagattctgaac
gaggcagcagcagaaggcaggggtagtttatgtaaccaggcaataatgctgattactgat
ggagccatggaggatttccagaaggtgtttgaggagttcaactggccagaccgcaaggtg
cgcgtgttctcatatctaattggacgagagctaacatttgctgacaatgtcaaatggatt
gcctgcaacaataaaggttactacacccatatctctactctggcggatgtacaggagaat
gtaatggaatatcttcatgtgctgagcaggccaatggtcatcaaccatgatcatgacatc
atctggacagaggcttacatggacagtgtgctttttaacacacaggctgagagtttgctg
ttgatgacctctgtggccatgcctgtgttcagcaagaaagaagaaacactgtctcacggc
atcctccttggtgtggttggcactgatgtccctttaaaagagctcatgagattggctcct
cgatacaagctgggagttcacggctatgcattcttaaatactaataatggttatatactc
tctcatcctgaccttcgacctctgtataaagacggtaagaagctgaggccaaagcctaac
tataatagtgtggatctgtcagaggtggagtgggaagatacagaatatgcattgagaacg
gcaatggtaagaggggaaagtgggacaatctctctggatgtcagagcaacagtagataaa
ggaaagagagttgtcttcctgaaaaatgaatatttttacaccatcatcaacgaaactcca
ttcagtcttggaattgtacttaccaatggtcacgggaagaatgttttcatcggaaatgtt
tcagttgaagagggcctacatgacctgacagcatctgatgtcactattgctaatgaatgg
acatactgcgagacagacatcgatccacatcaccgcaaattgacacagtttcaggccgtg
gttcgatatctgttagggaaagaaccagacctggagtgtgatgaaagactcctgcagcag
actctgtttgacgcagtcatcacagctcccatggaagcctactggactgcactgctgctc
aacgcctccggtattgatgcgggtgtggagacggcgttcctgggcacacgctccggcctc
atgaggatgaccagatatgttggcgaagagaaacgtgtggggaaaaaattcttaactcca
tctgataaggagaatatttttactctggaccatttccctgtttggtatcggcgtgcagca
gagaatccagctggaagctttttgtactacgttcctacagaggacaacacaggagtggat
ggaagggttgtgattgcagtcacgtctgttacagtcactgtaaacaaaaagacagcaatt
gctggagccataggtgtacaggtgtctcttgagatgttggaaaaaaggctttggtccgta
gccactcaggcgaatgacaaagattgttctggtgtagaggggctttgtcctctaagctgt
actgataatgacattaactgctacgtcattgacagtaatggcttcatcatcatctctaag
gacaggactgatgttggaaggtttctgggggaaatcgatgggtcggtaatgtcacagctc
ttgagaatgggcatgtttaaaagagtgttactgtatgactatcagggcatgtgtaaggcg
aatactcactctgctagcggcgctcgacccctgctaagtcccttttataatctcctggca
gcactgagatggttcctatcgaacttcttgctgtttttactggacttcaacatctacggt
ctatggcattccgatcactttgtggaggccaagaccttattccattcatctggtaagaag
tcaaaggggggcattctgcagccatgtgacactgagtatcccagcttcgtctacgagccg
tcaatcaaagaaaccaacagcctgatcaagtgtgggagatgtcaaaaggtgtttgtaatt
aatcagattccagacagtaacttgctgttggtggtgattcaggcagattgtgactgttct
cggcagtacgcacccatcaccatggagcccaaagaggtcaaatatatccttaaaaaccca
gctaaatcaggctccccagaccacacactgaggagatga
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