Rhinichthys klamathensis goyatoka (western speckled dace): 130072455
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Entry
130072455 CDS
T09701
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130072455 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130072455 (fancc)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
130072455 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
130072455
NCBI-ProteinID:
XP_056093532
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MGAVSETDVQFWMAKAVSWGEATSCSALLDTSRHLGYLRSFLQQVLLGLQQMSSTSEAMK
TFPFVGQFLGRLCWNPCVIADERSQRLLLRCLSCLYSAEPLNAVERKANTWIKNMLCHLI
SEEEGSVSHATVKHAGSSPKRYHSEALQKVVSLMTDEVIKSCDGLPKTSARCSNENIHTM
STACAALVTCPQMAPLIGALLKHSLLCGSSCLNQEFIKEVSEALISKRLVLEDEAVMTLW
CLSHTCLEGAAVSLLESVLSDHESMTQSLDKHVNDSLLPQASAHYCHIFLAVTEIYRNVL
KEIDENLALRALVQVFTACFLQRVTGQKPQDRLPLRAFFPNATPSLLSPLLTAPSEVPRQ
AWLDHLSWIRSLLQSVTENEAAGEDVRAYESVFEAWFLLVQCGYWVDTAVELLVLAEPEN
AEPLLWLLTFFHHPTNRGHQRSQQTAVAREAWTHLRILFLTRPPPPSHLSAVKELLSSSL
STNLVLHLFSNFAIFSHGPVSIITEITDKVLTEAAVKRRALWILSSIRCRLNSAASWDDG
VHSRLRTLQDTLLQT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtttcggagacagatgtgcagttctggatggctaaagcagtgagctggggc
gaggctacatcatgttctgcccttctggacacaagcagacaccttggttatctgaggagt
tttctccagcaggttctgctggggttgcagcaaatgagctccactagtgaggccatgaag
acgtttccttttgtgggccagttcctgggaagactttgttggaacccatgtgttattgcg
gatgagagaagccagagactcctgctgcggtgtttgagctgtctgtacagcgctgagcca
ctgaacgccgttgaacgaaaagccaacacttggatcaagaatatgttgtgtcatctgatc
tcggaggaggagggcagtgtatctcatgctacagtaaaacatgctggatcaagcccgaag
cgataccactcagaggctcttcagaaggtggtgtcattgatgacagacgaggtcattaaa
agctgtgacggcttgccaaaaacatcagcaagatgttcaaacgagaacatacacaccatg
tcgacagcatgcgctgccttggtcacatgtcctcagatggctcctctcattggagctctg
ttgaagcattccttgttgtgtggctcttcctgtctgaatcaagagtttattaaggaagtc
agtgaggccttgatcagtaagaggcttgtgttggaggatgaggctgtaatgaccctgtgg
tgtcttagccacacctgtctggagggggcagcagtgagcttactggaatctgtgctgtct
gaccatgaatcaatgacacagagtctggacaaacatgttaacgactcattactgcctcaa
gcttcagcccattactgtcacatctttctcgcagtcaccgagatttacaggaatgtgctg
aaagagattgatgagaacctggccctgagagccctcgtacaggttttcactgcctgcttc
ctccagagggtgactggacagaaacctcaggatcgtctaccactcagagccttcttccca
aacgcgacgcccagtttactctctcctttactgacagcaccgtcagaggttcccagacaa
gcctggctggatcatctgagctggatcagaagtttacttcagagcgtgacagagaatgag
gcggcgggggaagatgtcagggcgtatgagtctgtctttgaagcttggttcctgctggtg
cagtgtgggtactgggtggatacagctgttgagctgcttgttctggcagagcctgagaac
gccgaaccgctgctgtggctcctgacgttcttccaccaccccaccaacagagggcaccag
aggtcccaacaaaccgcagtggccagagaagcctggactcatctaaggatcctgtttctc
actcgtcctccccctcctagtcacctcagtgctgtgaaagagctcctgtcctcctctctt
tcaacaaacctcgtcttgcatctgttttcaaactttgccatcttttcccatggacctgtt
agcattatcactgaaataactgacaaggtgctgactgaggccgctgtgaagcgcagggca
ctgtggatcctctcttcaatacgctgcagactaaacagtgctgcctcgtgggacgacgga
gttcattccaggctgaggacgcttcaggacaccctcctccaaacctga
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