Rhinichthys klamathensis goyatoka (western speckled dace): 130072478
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Entry
130072478 CDS
T09701
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 6
KO
K26585
methyl-CpG-binding domain protein 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130072478 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130072478 (mbd6)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130072478 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
130072478
NCBI-ProteinID:
XP_056093573
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MTGGSESAAGEKDGGTALIAQIPVGWQRKVGDGLVSYISPSGTVLRSVDEVRVYLRTDGT
CKCGLECPLVPNKVFNFDPAAMVQAPGHHSSRVEEDMTKLCNHRRKVDAMAALCQSRQPS
QPPPPAQATGGVACSVDGRELRGSIVAHGDGAHCTYPPPRHNQPKSNIGFPLSSSRSVLQ
QNGSPISRPPEQGSPLKKPQTPLAYTKQQWSPHPSISQNIPQRTVHNPASPSNVKPSVHT
HAHPPDPSNSFSLSPSSSVALSGRAHSQGVSVKSPSSLSPSRSLDTFSPHQRSRHSSTSS
LSDHGTPGCVFKPLKATMPCSSPKLPLAPSSPCSRLEGILQHYKDCSTSNANQSNHLSLV
HPNVGDKRNGLSSTQGQELLGVPLGQILNQQKIQQKSHINNSFPASSLLSAAAKAQVANQ
KTPSQLNASDALATLPLTSLDKEQHSKVLISTLNSSVHPTSARTQSLTALLLPHSPSLSP
ASPAEKNLRRKRQRHSPTVLSMRKDSHLGRSPDLSGPPMLISPCLSPTSPPVPHSDNHRV
SVAPPNASFSNSSLRLQDSEEGRKPGNSIPLSSPSPSQPLSALLQLLSMQSATQQSSGAI
AIPGHRHTNTLPSSPRPITPQTPHCEGQSTLRVPNPQPQPQSTVPIPETPSQPPQSQPFT
LMGDETTLNLKTTSSNTFLNLSQPHTGTTPDLNSSILSMMNQMSSTSCFPEKSYESKSTE
TCPDHNTYQISQSNHNQAVESKGPVETMDHPDSDTRLLGGCDPDHSLSLSGSSSSELPNP
GVSLPLAEAFPFMTQEQLLQLLSSNAGLPSLLPPFLGSLPLGLWTGGTQSQHPQPTSAIL
NQGAHLNVINQGDLPLNLMSLLNPPGSAPASPTVAGIEGGEKPPGLQALLMASLLLGQNP
AAMLPLPALNLELPTPQQQVFPDGVSLEKTPTLLDSVLMGPGLLEALQTLQADGQSLLLS
APLTPPAFLSLNPALLAAALAQTEPLPNHTPSPPPHSQETLSSSALVSTSVSCGPEVCDP
LDEQDKNNTQTPHFLPHLLAPGVLGDLTALGNINSLHSLLGAGPLLLPQGPSLNQTPLNP
LTCLQLTMTPALMGEKPVSLHHTPPPSQDELPAAQISQNALLHTPGQQREGSGSGLFDPY
GSFMDTIYTSFLQVSERDSDPTALSYPELPLALSPRRACSVHNPDLTRLGMDSAQSPARG
TPKLSEEPSTAPPCRPSGADALSDIMEEAKTDGSTVCYSNGIGSGTDGRGDRDEEEEADE
DDEEGRRTQGCLSPPVDDISSREAEQVRTEDLHTGARRGRKRKQTLQRSPDLPGGIDSII
EEPAATIPSSRPARSTRGKRRRVVR
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgacggggggcagtgagagtgcagcaggtgaaaaagatggaggtacggcgctcatcgct
cagatcccggttggctggcagaggaaagtgggagatgggcttgtgtcttacatcagcccg
agtggtacagtccttcgatctgtggatgaggtgagggtgtatctgcggacagacggcaca
tgtaagtgtggtctcgagtgcccgcttgtcccaaataaggtctttaattttgaccctgct
gcgatggtccaagctcctggtcatcattcgagtagagtagaggaagacatgaccaaactc
tgtaaccatcgcaggaaagttgatgccatggcagcattatgccaaagcaggcaaccctcc
caaccccccccgccggctcaagccacaggaggtgttgcatgttcagtggacggcagagag
ctgagaggatcgattgtggctcatggagacggcgcccattgcacttaccctcctccaaga
cacaaccagcccaaatccaacattggctttcctctgtcctcttctcgctctgttctgcag
caaaacggttcccctatctcacgacctccagaacagggttcccctttaaagaagccccaa
acgccattggcatatacgaaacagcagtggagccctcatccatcgatctcccaaaacatc
cctcaaaggacagtgcataaccctgcttctccaagcaatgtaaaaccaagtgtgcacacg
catgcgcatcctccagacccttcaaactccttttccttatcgccctcctcatccgtagct
ctcagtggtcgagcacattcacagggagtgagcgttaagtcgccgtcgtctctatcaccc
tcacgttccctagacaccttctcaccccaccaacgctctcgccactcctcgacgtcttcg
ctctcagatcacgggaccccggggtgtgtcttcaaaccgttgaaagccaccatgccatgc
tcctctcccaagctccctcttgcgccttccagtccgtgtagtcgcttggagggaattctt
cagcactacaaagactgtagcacctccaatgctaaccaaagcaaccatctgtcgttggtg
catcccaatgtaggcgacaagaggaacggattgagttctactcaaggacaagaattgctt
ggcgttcctttaggacagattctcaaccaacagaagatccagcaaaagagccacatcaat
aactccttcccggctagcagccttctttccgccgccgctaaagctcaggtggccaaccag
aaaaccccaagccagctcaatgcatccgatgcgctcgccacactccctcttactagcctg
gacaaggagcaacactcaaaggtattgattagcactttaaacagtagcgtccacccaaca
tccgccagaacgcagtccctcaccgctttgttgctcccgcattccccttccctttccccg
gcttcgcccgctgagaaaaacctgcggcgcaaacggcaaaggcattcgcccaccgtttta
agcatgcgtaaagactcacacttgggtcggagtccggatctatccgggcctccgatgctc
atctccccatgcctttccccaacttctcctcccgtacctcactcagacaaccaccgggta
tccgtcgctcctccgaatgcctccttctcgaacagttctcttaggttgcaggattcggag
gaaggaaggaaacccggtaattcaatcccactttcctctccatctccatcccagccgctt
tccgctctacttcagcttcttagcatgcaaagcgcaacccagcaatccagtggggcaatt
gccattcctggacaccggcacacaaacacattgccctcttcacccagacccatcacgcca
cagacgccccattgcgaaggacagtccacattacgagtacccaacccgcaacctcaaccc
caaagcacagtgcccattcccgaaactccttcccagccgccccaatcccaaccctttact
ttaatgggtgacgaaacaaccttgaacctcaaaaccacctccagcaacaccttcctgaac
ttgagccagccccacacgggcacgacgccggacctcaacagttcgattctgagcatgatg
aaccagatgtcctcgacctcctgcttcccggagaaaagttatgagtccaaatcgacagag
acttgccctgaccacaatacctaccaaattagccagtctaatcacaaccaagctgtggaa
agtaaaggtcccgtagagacgatggatcacccggactcggacacaagattgctgggtggt
tgtgatcccgaccacagcctctctctatccggctcctcgtcttccgagcttcccaacccc
ggtgtttccctgccgctagcggaggcttttcctttcatgacccaagaacagctcctccag
cttctctcctccaatgccggtctaccttcccttcttccacccttcctcggatccctacct
ttaggactctggacgggcggcacccaatcccagcatccccagccaaccagtgccatccta
aaccagggcgctcatctcaacgtcataaaccagggcgatcttcctctcaacctcatgagc
cttttaaacccaccgggttcggctccagcttctcccactgttgcagggattgaaggtggt
gaaaaacccccagggcttcaagccctcctcatggcttctttgcttctcgggcagaatccg
gccgccatgttgcccttgcccgcgctcaacctcgagcttcccacgcctcaacaacaggtc
tttccggatggagtatctctggagaaaacacctactcttctggactctgttttgatgggg
ccggggctcctggaggctcttcaaactcttcaagcagacggccagtcgcttcttctttcc
gcacctctcactcctcccgccttcttgtccctcaatcccgctcttctggccgcggctctc
gcccagaccgaaccccttcccaaccacacgccatcccccccgcctcattctcaggagact
ctgtccagctctgctctagtttctacctcggtgtcctgcggcccagaagtgtgtgacccg
ctggacgagcaggacaagaacaacacccagacacctcattttctgccgcatctcctcgcc
cctggggttctgggcgacctcacagctctgggaaacatcaacagtcttcatagtttactg
ggagcaggacctctgttgcttccacagggcccgtctctgaaccaaacgcccctcaacccg
ctcacctgcctacagctgacgatgaccccggcgctcatgggagagaagccagtgagtctc
caccacacgccgcctccgtcacaagacgagcttccagcggctcagatatcccagaatgcc
ttgctccacacccccggtcagcagagagagggttctggttctgggctgttcgacccgtac
ggttccttcatggacaccatctacacctcgttcctgcaggtcagcgagcgcgactcggac
cccacggcgctgtcgtacccggagctgccgctggccctcagtccccgccgggcctgttcg
gtccacaacccggatctgacccgcctcggcatggactcggcccagtctccggcccgcggc
acgccgaagctcagcgaggagccctccacggcgccgccctgcaggccgtcgggggccgac
gctctgtccgacatcatggaggaggccaagaccgacgggtccacggtgtgttacagcaac
gggatcgggtcgggaacggacggaagaggagaccgggacgaggaggaggaggcagacgag
gatgatgaggagggacgaagaacgcagggctgtttgagtccgcccgtcgatgacatcagc
agcagagaggcggagcaagtgaggactgaagacttgcacacaggagccagaagggggcgc
aagaggaagcagacactgcagaggagtccagacctgccgggcggcatcgacagcatcatc
gaggagcccgccgccacgatcccgtcgtcgaggccggcccgctccaccagagggaagaga
cgccgcgtggtccgatag
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