Rhinichthys klamathensis goyatoka (western speckled dace): 130072523
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Entry
130072523 CDS
T09701
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130072523 (elp1)
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
130072523 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_EML_2
Sin3a_C
Barwin
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
130072523
NCBI-ProteinID:
XP_056093634
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MRNLSLLQRLRCVDLPIPGSPQCFTIRSEDGTVLVASELAITEYDPRTGEVYKEVSLMTD
DYLPEDGSGLVVGIQDLPDQESVCVATASGDVILYNLNTSQLECVGSVDSGLTGMTWSPD
QELVTLTTGQETIIMMTKDFEPITEVAINQDDFGEDKFITVGWGKKETQFHGSEGKQAAQ
RKAAEVQPALPWDDRKPRVTWRGDGQFFAVSAVCPKAGARKVRIWNRECVLQATSEVVNG
LEHPLCWKPSGSLIASTQRHPNKHSVVFMEKNGLMHGDFTLPFGKDQVKVKELLWNSDST
VLGVWMEDLKAGEINHPNTYIQLWTVGNYHWYLKQSLHFGNEPLRAPACVCWDPEKPLRL
HLLTRGWAGYTYDWGWSTQRSCGNDSHDNANVAVIDGDKILVTTFRQCVIPPPMCAFELQ
LPVPVNLVTFHSQAQRTNELAALTADGHIYVYGEGGGVENGGVPKVLGFNVISAPLVLRK
TYRVAADHGEPLTLRLLLWLSEDLFLAVAHGVCLTRLLKLTPSDSQDPKDTLEIRSDVPV
DGHVISLCHSLRNGTVALQLEDGQIRKLLMDSSELSLTEWKDSTGNTINFPRPCVQTALC
SLGGEEYLIGLTERSHLYIGDSLVASNISSFVVYDDFLLLTTHSHMCHCLNISTLSVKGL
QSALSSDANQNDETVRKVERGSRIVSVVPQDTRLILQMPRGNLETIHHRALVLSQLRKWL
DGLRFKDAFESMRKLRINLNLIYDHNPSVFLDNIEMFLKQIDSINHINLFLTELKEEDTT
TTMYPSPSRSASSTASGKGGKKVDIVCDAFRSTMETLDPQKYCLCVLTSHVRKTTPELEI
ALQKVHELRVNPPSGSNSVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQKD
PKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCDEEHFTELLNLVKDQKLYSD
ALELYPSDSEQYKTLSVAYAEHLVEQQQAEQAGLLLWRCGETGRALQAFISCTSWRHALA
VATHIPLPSEQLALLARDLAEKLLEARRHTEAALCLEQYAKDCEEAISALIQGAAWEEAL
RLIYLYNRQDIIETNLKSALLDAHSNQTSFLESQKTLFIRHKNRLAVVRELKAKARFELF
DEDGADCADAELYSEASSVLTGSHLGSKYSRSNSRISSRSSKNRRKAEGKKHSLKEGSPF
EDIALLNALIQMITIVDKMREEVHSLLKALVLFQFDGPASSLQRDYSVLLQLMEAALPEI
WSENLQQGQTPLTGPNSTANSITASLQQQRPAVPQQDADALTAPKMRNTIKWKLSILK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacctcagcctgctgcagcgcctcagatgtgtggatcttcctatcccgggatcc
ccgcagtgtttcaccatcagaagcgaggatggaacagtgctagtggcctctgaacttgcc
atcacagagtacgacccacggaccggagaggtttataaagaggtttcactgatgacagat
gactatctcccagaggatggtagtgggcttgtggtgggaatacaagatctgccagatcag
gagtcagtgtgtgtggccactgccagtggtgatgtcattctctacaacctcaacaccagt
cagttggagtgtgttggcagtgtggacagtggtctaaccggtatgacttggagcccagac
caggagttggtgactctgaccacaggtcaggagaccattatcatgatgaccaaggacttt
gagccaataaccgaggttgcaatcaatcaggatgactttggcgaagataagttcatcaca
gttggttgggggaagaaggagactcagtttcatggctctgagggcaagcaggccgcccaa
cggaaagcagcagaagtgcagcctgccctgccgtgggacgacaggaagccaagggtcact
tggcgaggcgatgggcagttctttgccgtcagtgctgtttgtcccaaggctggtgctcga
aaggttcgtatctggaaccgagaatgtgtcctgcaggccaccagcgaggtcgttaacggt
ctggaacaccctctctgctggaaaccctctggcagcctgatcgcttccacacagcgacac
cctaacaaacacagtgtggtgtttatggaaaagaacggactgatgcatggagattttaca
ctgccttttggaaaggaccaggtcaaggtgaaggagctgctgtggaacagtgactctact
gtactaggggtttggatggaagacttaaaggctggagagatcaaccatcccaacacttac
attcagctgtggactgttgggaattatcactggtatctgaagcagagtttgcatttcggc
aatgagcccctcagggctccggcgtgtgtgtgttgggatccggagaagcccttgcgtctc
cacctcctgactcgaggatgggccggctacacctacgactggggctggagcactcagcgc
agctgtggcaatgattcccatgacaacgccaatgtggcagtgattgatggagataaaatt
ctggtgacaacattccgccagtgtgtgatccctccacctatgtgtgcgtttgaacttcaa
cttcctgttcctgtcaacttggtcaccttccattctcaagcccagaggaccaatgagctc
gcagctctcacagccgatgggcatatttatgtatacggggaaggtggtggagttgaaaat
ggaggtgtacccaaggttcttggctttaatgtcatctcagcaccattagtcttaagaaag
acatacagggtcgccgcggatcatggggaacctctaacgctgcgcttgctgctgtggttg
agtgaagatttgtttttggctgtggcccacggagtgtgcttgacacgcctgctgaaactg
accccatcagatagccaggaccccaaggacacactggagatcaggtcagacgttcctgtg
gatggtcatgtgatcagcttgtgccacagcctcagaaatggcactgtggccctgcaactt
gaagatggacagatccggaaacttcttatggactcttcagagctcagtctaacagaatgg
aaggattcaactggcaataccatcaacttccctcggccttgtgttcagacggcactgtgt
tccctcggcggagaagaatacttgataggcctcactgagagatcacacctctatatcggt
gactcactggtggcttccaatatatcttcatttgtagtttatgatgacttcctcttgctc
accacacactctcatatgtgccactgtctcaacatcagcacgctctctgtcaaaggtctg
cagtcagctctgagctcagatgccaatcagaatgatgagactgtaagaaaggtggaacga
ggctctcgtattgtttctgtggttccccaggacaccagactcatactgcagatgccacga
gggaacctggaaaccatccatcatcgggctcttgtactttctcagctcagaaaatggctt
gatggtctcagatttaaagatgctttcgagagcatgaggaagctgaggatcaacctcaac
ctcatttatgaccacaatccctctgtgtttcttgacaacattgagatgttcctgaaacag
attgactccatcaaccacatcaacctgttcctcactgaacttaaagaggaagacaccacc
acaacaatgtacccgagtccttcacgctctgcctccagtacagcttcagggaaaggagga
aagaaggtggacatcgtctgtgatgctttccggtccacaatggagactctcgacccacag
aaatattgtttatgtgttcttacatcacacgtgagaaaaactacaccagaactggaaatc
gctctacagaaggtccatgagttacgagtgaacccccccagcggctccaacagcgtgagc
gcagaggaagctctgaagtatcttctcttcctcgtcaatgtaaacgagctgtatgagcat
tccctcggcacttacgattttgacctagtgctcatggtggctgaaaaatctcagaaggac
cctaaagagtacctgcccttcctgaacatgctgaaaaccctggagccaaactaccagcgc
tacaccatcgataaacacctcaagagatacaggaaggccttacatcacctcagcaagtgt
gatgaagaacacttcacagagttgttaaacttggtgaaagatcaaaaactgtacagtgat
gctcttgagctctatccttcagacagtgagcaatacaagacactgagcgtggcctatgca
gagcatctagttgagcagcagcaggcggagcaggcgggactgttgctatggagatgtgga
gagacgggccgtgccctgcaggccttcatcagctgtacgagctggaggcatgccctcgcc
gtggcaacacacatcccgttgccatccgaacagctggcgctgcttgccagggacctggca
gagaaacttctagaggccagaaggcacacagaagccgccctgtgtttggagcagtatgct
aaggactgtgaggaggcgatatccgctctgatacagggagctgcatgggaagaagcgctg
agattgatttatttgtacaacagacaggacatcattgagacaaatctgaagtctgctctt
ttagatgctcacagtaatcagacgtccttcctggagtcccagaagactttgttcatccgc
cacaaaaaccgtcttgctgtggtccgagaacttaaagccaaggccagatttgagttattt
gatgaggatggtgctgactgtgcagatgctgaactctactctgaggccagcagcgtcctg
accggcagccatcttggctcgaaatactctcgcagcaactctcgcatttcatcgaggtcg
tctaagaatcgtaggaaagcagagggaaagaaacacagtctgaaggagggaagcccattt
gaggacatcgccctcctgaacgcacttattcaaatgatcaccattgttgataagatgaga
gaggaagttcacagcctgctgaaagctctggtgctcttccagtttgacggtccggccagc
agcctgcagagagactacagtgtcctgctgcagctcatggaggcggcccttccagagatc
tggagtgagaacctgcagcagggccaaactccactcacaggtcctaactcaacagccaat
agcattacggcatcacttcagcagcagagacccgctgtgcctcagcaagacgcagatgcc
ctgactgctcccaagatgagaaacaccatcaagtggaaactcagcattctcaaatag
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