Rhinichthys klamathensis goyatoka (western speckled dace): 130072592
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Entry
130072592 CDS
T09701
Symbol
bard1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130072592 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130072592 (bard1)
04121 Ubiquitin system [BR:
rkg04121
]
130072592 (bard1)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130072592 (bard1)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130072592 (bard1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130072592 (bard1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130072592 (bard1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130072592 (bard1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
130072592 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
BRCT_2
BRCT
zf-RING_6
Ank_KRIT1
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
130072592
NCBI-ProteinID:
XP_056093745
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MGFCAGPYAGDGCTVCQGPAWVKDIQINKQLSNIXQLFCKLESPESSTTATAVQSEKSSV
PKNKKNIKMWFSPKSRKIRCCIEKPAGSNKSNGFQGMEATSSEPKDLSVFNFTSSSQESG
SSTPPRRKANKKTKKKRSQVYRKASGGQRPTTRTQTMQECKRLKLEAINQHWAIGKQAAI
DKKDEEHEKLSSGDEYRGSGKRVSFLFPRSQPEETHKAPHQGENQIPSPQKSILRNMEIE
NREKQNCATLSSSYHDQQVVVDTDIPPESNENAPGPPQPSLPGTGKRTRENQDSYGPQST
PKQPRNSGRKNRLSKEGTEDPSQRTSRQSNEKQNVKPITPATPDLRRKSPSVRRNQTSPS
FMKRNHNGETPLHLAAIKGDVEEVRKLLAQGADPNLKDNAGWTPLHEACNLGHLGVVEEL
LQQGALLNTPGYQNDSPLHDAIRNGHIAVVKLLVERGASQSVLNMLGLRPVDYALTPEMQ
EVLRMAPEALTTTLRPRASLNKAAGCVRETGPVVLIGSQLTQTQQKQLSKAAQLLGGKQV
KSFSSAVTHVVVPDVPIMPSILTTLQGVLNGCWMLRFSWVCCSLQAGSWVGESEYEAGDG
PLRARANRGSLLPPLFDGCFFYMLGSFFKPPKHELLQLVKAGGGQLLNRQPKPDSDVTQT
LSAAAYHAQPGSDQILCTQYILYDPQNSYKPQKVRVGKVWSAPSTWLLGCIAAFQLLPVP
EP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggggttttgtgcaggaccttatgctggtgatggttgcactgtgtgccaaggtcctgct
tgggtgaaagacattcaaatcaacaaacagctcagtaacatannacagttattctgcaag
ctggagtcaccagagtcctcaaccacggccactgccgtacaatcagaaaagagctctgtc
cctaagaacaagaagaacatcaagatgtggtttagcccaaaaagtcgcaaaatacgctgc
tgtattgagaaacctgctggatcaaacaaatcaaatggattccagggaatggaagccact
tcgtctgaacctaaggacctgtctgtcttcaacttcacctcttcctcccaggaatctggc
tcatccactcctccacggaggaaggcaaataagaaaacaaagaaaaaaaggagccaagtc
tacagaaaagccagcggtggtcaaagacccacaacacggactcagactatgcaggaatgt
aagaggctgaagctagaagctatcaatcagcattgggccattggaaaacaggctgctata
gacaagaaggatgaagagcatgagaaactgagctctggagatgaatacagggggtccggt
aagagagtttcttttcttttccctcgcagccagcccgaggagactcataaggctcctcac
caaggagagaatcaaattcccagtccccaaaaaagcatattaagaaatatggaaattgaa
aaccgtgaaaagcaaaactgtgcaactttgagttcatcatatcatgatcaacaggttgtg
gttgacactgatatcccaccagaatcaaatgaaaatgctccagggcctcctcagccttcc
cttcctggaactggtaagagaacaagagagaatcaggacagttatggtccgcagagtaca
ccaaaacaacccagaaattcaggacggaagaataggttatctaaagaaggaactgaagac
ccctctcagaggacatccagacagtccaatgagaagcagaatgtgaagccaatcacacca
gctacccctgacctcaggaggaagtctcccagtgtgagacgaaatcagacaagtccctct
ttcatgaagaggaaccacaatggagagacgccactgcacttagctgccataaagggtgat
gtggaggaggtccgtaagctccttgctcagggagctgaccccaacctgaaggacaacgca
ggctggacaccactgcacgaggcctgtaatctcggtcatctgggagtggtggaggaactg
cttcagcagggggcgctgttgaacacaccaggttatcagaacgactctccactgcatgat
gccatcaggaacggccacatagcggtggtcaagctcttggttgaacgaggcgcgtcccaa
agtgttctaaatatgcttggcctgcggccggtggattatgcactgactccagaaatgcag
gaggtcctaagaatggccccggaagctttaacaaccaccctgaggccccgcgccagcctc
aataaggctgcaggctgtgtgcgggagacgggtccagtggttctgattggcagtcagctg
acgcagactcagcagaagcagctctccaaagccgctcaactccttggaggaaaacaagtg
aagtccttttcaagtgcagtcacccatgtggttgtaccagatgttcccatcatgccctct
atcctgaccacactgcagggagtcctcaacggctgctggatgctccgtttcagctgggtg
tgttgtagccttcaggcaggcagctgggtcggggagagcgagtacgaggcaggtgacggc
cccctgcgtgcccgtgcgaacagaggcagcctgctgcctccactctttgatggctgcttc
ttctacatgctgggctccttcttcaaaccgcctaaacatgagctccttcagttagtgaaa
gcaggaggaggtcagcttctgaatcgccagcccaagcctgacagtgatgtcacgcaaacc
ctgagcgcagcggcctaccacgctcagccaggttcagaccagattctctgcacccagtat
atcttatatgatcctcagaactcctacaaaccccagaaggtccgagtaggtaaggtgtgg
tcggctccatccacgtggcttctgggctgcatagctgccttccagctcctgcctgtgccg
gagccctag
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integrated database retrieval system
