Rhinichthys klamathensis goyatoka (western speckled dace): 130072615
Help
Entry
130072615 CDS
T09701
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130072615 (capns1a)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C2: calpain family
130072615 (capns1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
130072615
NCBI-ProteinID:
XP_056093777
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MFLAKKFLGGIIDVVSNIDPGQFVPSEPPPPRRPLAYAEVNESEEEKQFRKVFQQLAGDD
MEVSPNELMNILNRIISKHGDLKTDGFTIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIK
KWQAVYKAYDRDRSGTIGADELPGAFKAAGFPLNEQLFQMLIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNDGTIKVNIQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttcctagccaagaaattccttggaggcattattgatgtggtcagcaacatcgacccc
ggccagtttgtgccttctgaacctcccccgccccgcagaccgctggcttatgctgaggtc
aacgagtccgaggaagagaagcagttccgtaaagtgttccagcagctcgctggcgatgac
atggaagtaagccccaatgaactgatgaacatcctcaacagaatcatctccaaacatggt
gatctgaagacagatggctttaccattgagtcatgtagaagtatggtggctgtcatggat
agtgacagcacaggtaaattgggcttccatgagtttaaacacctctggaacaacatcaag
aaatggcaggcagtttataaggcttatgacagggatcgctcaggaactattggagcagat
gagcttccaggtgccttcaaagctgcaggtttcccattgaatgagcaactctttcagatg
cttattcgcaggtatagcgatgagagcggaaacatggattttgacaattacatcggctgc
cttgtgagacttgatgccatgtgccgcgccttcaagactcttgacaaagacaatgatggc
acaatcaaggtcaatattcaggagtggctgcagctgacaatgtactcctga
DBGET
integrated database retrieval system
