Rhinichthys klamathensis goyatoka (western speckled dace): 130072663
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Entry
130072663 CDS
T09701
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130072663 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130072663 (zgc:163098)
Spliceosome [BR:
rkg03041
]
Complex A
U2 snRNP components
U2 related factors
130072663 (zgc:163098)
Complex B
130072663 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
130072663
NCBI-ProteinID:
XP_056093846
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MADKKGKSVGVKRTLTKREQEEMKKKEEEKAAEVFEEFLASFDTNDKSGVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPASKFNSPPQNASPVQPTEVKKAAAKKKTEEKKKSNLELFKEE
LKQIQEEREERYKRKKGDSGVYPDLDLPLTRRSIFDDDPAVPNTTNLYIGCINPKMTEEM
LCKEFGKYGPLASVKIMWPRTDEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEMK
LGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRSRSQEDFYKT
LSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAIIMNREKNNPEFRFLFDNKTQEHV
YYRWKLYSILQGENPNKWRTSPFRLFRGGSLWKPPLLNPYLHGDEEIEEISFPSQEEEPK
KGQLKAEHRERLEALLRGLTPRRDEIGDAMLFCLERAEAAEEVVSCITESLSIVHTPLQK
KIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARLQAEQFKQRI
MGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERAEPESPDLDGAPLDGIPLDKVE
IDGTPLDDLDGSPMTWDPSSIDGVPVDDIDGVPLGNSIDDIDGVPFDEGSDKTLPTVALS
KWEKVDSESSAKNDSDTEMNSSGLKENNGDSDISSDEADSPSRYEGAEFKSSLKNFELSE
SKRTRLRELEVKVMNFQDELESGKRQRKSSMNLQQQVQHYRNRLLQKEFDKDDQEKKDKY
SQKPKDRSKKDERRDKEDRSKTRDKEKSRKSEDRERSRGRSRDKEERRERTKSRSPRKSK
RSQSPSPQHKSWRSSSRSPHRSHKKTKKSKH
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaaagggaaatcagtgggggtgaagaggacactaacaaaaagagaacaa
gaggaaatgaagaaaaaggaggaggagaaagctgctgaagtctttgaggaatttttagct
tcttttgacactaacgacaaaagtggagtgaagacgtttgtacgaggaggcattgtcaat
gcaactaaagaggaagaagccgcagaggtgaagaagagcaaactctacagacccgcctct
aaattcaattctccacctcagaatgcctcacctgttcaacctacagaagttaaaaaagct
gcagctaaaaagaaaaccgaggagaagaagaagagtaatctggagctttttaaagaggaa
ttaaaacaaatacaggaggaaagagaggagcgatacaaaagaaagaaaggggactctgga
gtgtacccagatctggatttacctctgacacgaagatcaatatttgatgatgatcctgca
gtgccaaacacaacaaacctgtacatcggctgcatcaaccccaagatgacagaggagatg
ctctgtaaggagtttggaaaatacggtcctcttgccagtgtaaagatcatgtggcctcgc
actgatgaggagagaacgagagtcacaaaccgtggttttgttgctttcatgacacggaaa
gatgcagagcgtgctctggctgcgctggacggtaaaacagtaatgggttttgaaatgaaa
ctgggttgggggaaggcagtacgtattcctccgcaacctctttacaccccaatcggggtg
ctgaagaccactgccccccctccaccctctggactgccattcaacgcccaacccagagac
cgcttcagaaatgacttcaccaaaccacgcagtcgctcgcaggaagacttttacaagact
ctgtccgaggccgtagtgacagtggtaatccccccagaaaggaacctgctgggcttgata
cacagaatgattgagtttgtggtaagagagggtcccatgtttgaagccatcatcatgaac
cgggaaaagaacaaccctgaattcaggtttttgtttgataataagactcaggagcatgtg
tactacagatggaagctctactccattctacagggagaaaacccaaataaatggagaacg
tcccctttcagattgtttaggggcggctctctttggaagccccctctccttaacccatat
ctccatggcgatgaggaaatagaagagatctccttcccttctcaagaggaagagccaaag
aaagggcaactgaaggcagagcacagagagcggttggaagccttgctgagaggactgact
cctcgcagagatgaaatcggtgatgcaatgctgttctgtctagagagagcggaggctgct
gaggaggtcgtctcctgcatcactgaatctctgtctatagtgcacacaccactgcagaag
aagattgccagactttacctgatatccgacatcctctacaactcctgtgccaaagtggcc
aatgcatcatattaccgcaaattttttgagacaaagctgcctcagatatttggagacatc
agtgaagcgtatcggaacatccaggctcgactccaggcagagcagtttaagcaaaggatc
atgggatgttttcgtgcgtgggaggactgggcagtttatccagactccttcctgatccaa
ctgcagaatatattcctgggactcattaaacctggagaggaagtcattgaaagagcagag
cccgaatctcctgatctggatggagcgccgttggatggtattcctctagacaaagttgaa
attgatggtactccccttgatgaccttgatgggtcacctatgacctgggatccatcctct
atagatggtgtaccagttgacgacattgacggtgttcccctaggaaactcaatagatgat
attgatggtgtgccatttgatgagggctcagataagactttacccactgttgcactatcc
aaatgggagaaggtggattcagaatcttcagccaagaatgactcagacactgagatgaat
tcaagtggcctaaaggagaacaatggtgattctgatatcagcagtgatgaagctgacagc
cccagcaggtacgagggggcagagtttaagagttctctgaaaaactttgagctgtctgaa
agcaaaaggacacgtctcagagaactggaggtgaaggtgatgaatttccaggatgagttg
gagtcgggtaagcgacagaggaagtccagtatgaatctccagcagcaagttcaacactac
agaaacagactgctacagaaggagtttgacaaggacgaccaggaaaagaaagacaaatat
tcacagaaaccgaaagatcggtccaaaaaagatgagcggagagataaagaagacagaagt
aaaacacgggataaagagaaaagtagaaagagtgaggacagagaaaggagtagaggaagg
agtcgagacaaagaagagaggagagagagaacaaaatcccgatcaccacggaagtcaaaa
cgctctcaatcaccatcaccacagcacaaatcctggaggtcttcgtcccgatcaccacat
cgctcgcacaaaaagaccaagaagagcaaacactga
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