Rhinichthys klamathensis goyatoka (western speckled dace): 130072811
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Entry
130072811 CDS
T09701
Symbol
ccdc47
Name
(RefSeq) PAT complex subunit CCDC47
KO
K24962
PAT complex subunit CCDC47
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rkg03110
]
130072811 (ccdc47)
04131 Membrane trafficking [BR:
rkg04131
]
130072811 (ccdc47)
Chaperones and folding catalysts [BR:
rkg03110
]
Other chaperones and cochaperones
Others
130072811 (ccdc47)
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
130072811 (ccdc47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
130072811
NCBI-ProteinID:
XP_056094052
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRHLVFLLPALLLLLALPDTRGRYNDDFDDGEDIAEFDDNDFAEFEDVGEDPAVDVEKEP
PPRAAPSSTPIEDDEDEATVENEDGQDEFEDGDAQEQDMYSKYDNEEFEGYEKSNPSFKD
TLIYREVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLESN
FALVGDDGTSKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMM
RPVCDQVQVKVTLNDDDMDTFVFAVGSRKAMARLQKEMQDLSEFCGDKPKSGAKYGLPES
LSILSEMGEVTDGVMDNKMVHYLTGHADKIESIHFSDQFSGPKVMQEEGQPLKLPETKKT
LLFTFNVPGMGNTSPKDMDSLLPLMNLVIYSIDKVKKLRLNREGKQKADRNRARVEENFL
KQTHNQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRRDQKKLEKKQMKMKQI
KVKAM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacctggtcttcctcctcccagccctgctgctcctgttggccctgccggacact
agggggcgctacaatgatgacttcgatgacggtgaggacatcgctgagtttgatgacaat
gactttgctgagtttgaggatgtcggtgaggacccagcagtcgatgtggagaaagagcca
cccccacgggcagccccctcatccacacccatagaggacgacgaagacgaggccacggtg
gagaacgaagacggccaggatgagtttgaagatggcgatgcacaggaacaagacatgtac
agcaaatatgacaacgaggaatttgaaggctacgagaagagcaacccttcattcaaagac
actcttatatacagagaggtcccagcacacctgcagaacagctgggagagttactacatg
gagatcttgatggtcaccggtcttcttgcctatattatgaactacataattggcaaaaac
aagaacagcaggctcgctcaggcctggttcaattcccacagagaacttctcgagagcaac
tttgccctcgtgggggatgatggtaccagtaaggaggccaccagtacggggaagctgaac
caggagaatgagcacatttataacctgtggtgctcaggacgtgtttgctgtgaggggatg
ctgattcagcttaagtttctgaaaagacaagacctgctgaatgtgctggccaggatgatg
agaccagtctgtgatcaagtgcaagttaaagtgactctgaatgatgatgacatggacact
tttgtgtttgccgtggggagtcggaaggccatggcacggctgcagaaagagatgcaggac
ctgagtgagttctgtggtgataagcccaaatcaggggcaaaatatggccttcctgaatct
ctgtccattttatcagagatgggagaggttacggatggagtgatggacaacaagatggta
cattacctcaccggtcatgctgacaagattgagtccatccatttttcggaccaattctct
ggtccaaaagttatgcaagaggaaggtcagcccttaaagctgcccgagaccaagaaaaca
ctactgtttacatttaacgtgcctgggatgggtaacacatctcccaaagatatggacagt
ctgctgcctctgatgaacttggtgatctacagcatcgacaaggtcaagaagctccgcctc
aacagagaggggaagcagaaagcagacaggaaccgtgctcgcgtggaggagaacttcctg
aagcaaactcacaatcaacgacaggaggccgctcagacgcgccgcgaagagaagaagaga
gcggagaaggagaggatcatgaatgaggaggatcctgagagacagcgccgcctggaggaa
gccgcccaacgtcgtgatcagaagaagctggagaaaaagcagatgaaaatgaagcaaatc
aaagtgaaagctatgtga
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