Rhinichthys klamathensis goyatoka (western speckled dace): 130072816
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Entry
130072816 CDS
T09701
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130072816 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130072816 (gfap)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130072816 (gfap)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130072816 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Myosin_tail_1
DUF7491
GAS
KASH_CCD
TolA_bind_tri
YwqH-like
KLRAQ
BLOC1_2
DUF4515
NET2A
WEMBL
DUF4200
Prominin
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
130072816
NCBI-ProteinID:
XP_056094058
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MEPQRAFSSYRKRFGTPGGSPSVGITSRLSTGRLSLHSSPRHHTSSPATMSTSRLSLGGE
RLDFPTDSLLKAQYRETRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQLRGKE
PSRLGDIYQEELRELRRQVDGLNAGKARLEIEKDNLASDLATLKHRLQDETALRQEAENN
LNTFRQEVDEAALNRVQLERKIDALQDEINFLNKVHEEEMRELHEQLMAQQVHVDLDVSK
PDLTTALKEIRAQFETMATSNMQETEEWYRSKFADLTDAANRNGEALRQAKQEANEYRRQ
IQGMTCDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIHMLKEEMARHLQE
YQDLLNVKLALDIEIATYRKLLEGEESRITVPVQNFTNLQFRDTSMDTKLTPEAHVKRSI
VVRTVETRDGEIIKESTTERKDLP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccagcgtgctttctcatcctaccgaaagcgcttcgggacaccgggcggctcc
ccgtccgtggggatcaccagccgcctcagcacgggccgcctgtccctccacagcagcccg
cgccaccacacctccagcccagccaccatgtccacctcacgcttgtccctgggcggggag
cggctggacttcccgacggactccctgctgaaggcccagtaccgggagactcgcaccaat
gagaaggtggagatgatggggctgaatgaccgcttcgccagctacatcgaaaaagtgcgc
ttcttggagcagcagaacaagatgctggtggcagaactgaaccagctgagggggaaggag
cccagtcgtctgggggacatctaccaggaggagctgagggagcttcgcagacaggtggac
ggcctcaacgctgggaaagccagactggagatagaaaaggacaacctggcctcagacctg
gccactcttaaacatagacttcaagatgaaactgccctacgacaagaggcagaaaataac
ctcaacaccttcagacaagaagtggatgaagcggctctgaaccgtgtacagctggagagg
aagattgatgctctgcaggatgagatcaatttcctgaataaggtccacgaggaggagatg
agagagctgcatgagcagctgatggcccaacaggttcatgtggatctggatgtgtctaag
ccagacttaaccactgccctgaaagagatcagagctcagtttgagaccatggccacctcc
aatatgcaggagactgaggagtggtatcgctcaaagtttgctgatctgactgatgcagcc
aatcggaacggagaggctctgagacaagctaagcaggaggccaatgagtatcgtcggcag
attcagggcatgacctgtgacttggaatctcttcgtgggtctaatgagtccctggagcgt
cagctgcgagagatggaggagcgtttcgccatagagacggcaggttaccaggacaccgtg
gctcgtctggaggacgagatccatatgctgaaggaggagatggccagacatttgcaggag
taccaggacctactcaatgtaaaactggccctggacatcgaaattgccacctaccggaag
ctgctcgaaggagaagaaagcagaatcactgttccggtgcagaatttcaccaacttacag
tttagagacaccagcatggacactaagctgactcctgaggcacatgtgaagaggagcata
gttgtgcgaactgttgagactcgtgacggagagatcattaaagagtccactacggagagg
aaggatctgccttaa
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