Rhinichthys klamathensis goyatoka (western speckled dace): 130072889
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Entry
130072889 CDS
T09701
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101
KO
K10654
tripartite motif-containing protein 55
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130072889 (trim101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130072889 (trim101)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130072889 (trim101)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_6
Sina_RING
Spectrin_Anc-1_2
Asp_Arg_Hydrox
Motif
Other DBs
NCBI-GeneID:
130072889
NCBI-ProteinID:
XP_056094167
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MSLPLDIRSDHKDPSMGTLEKQLICPICLDVFTKPVVILPCLHNLCRKCANELYQPSLFQ
VGIGGRFRCPSCRREVVLDRHGVYGLQRNLLVENIIDVYKQELQESESSRPPPPKPLPQF
NCADHEDEKLNIYCITCQVPTCSLCKVFGAHKNCQVVPLPDVYLQEKAELNDRVASLVAT
NERVQSFVNELEALCRNIEENSRIQKQILCKKFDRMSAILEERRKIMTQQITSEQKEKSG
WTQSLLQTYSEHVDTNSKLIQEAQNAIEEPEMASFVQISKDLIVKVGEASNCFTLETLDP
DYENMNHYKVDFDAEERVLHQMDFLEIEEEVEETPDEQESEPESEPEPVLTPEPDPEPDQ
DLKSEASEMTNPTPETPETPEDNWEQEGGCGDIRKEAVCEKNSLSTSQVVTLALYFLAFL
VILQRIWGSIQCLTCI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccactggatatacgctctgaccacaaagacccctcgatggggacgctggag
aaacaactcatctgtcccatctgcctggacgtgtttacgaaaccagtcgttattctgccc
tgtctgcacaacctctgccgcaagtgtgccaatgaactgtaccagccatctctcttccag
gttggaattggaggccgtttccgttgcccttcctgtcggcgtgaggttgtcttggaccgt
catggagtttatggacttcagcgcaatttacttgtggagaacattattgatgtttacaag
caggaactgcaggagtctgaaagctctaggcctccaccaccaaagcctcttccacagttt
aactgtgcagaccatgaagatgagaagcttaatatttattgcatcacgtgtcaggtgccc
acctgctctctctgtaaggtgtttggggcacacaagaactgccaagtagttcccctgcct
gatgtttacctgcaagagaaggctgaactaaatgacagagttgcttctttggttgccaca
aatgaacgtgttcagtcatttgttaatgaactagaggcactctgcaggaacatagaggaa
aacagcaggattcagaaacagattctgtgtaagaagtttgatcgcatgtctgccattctg
gaggaacgtcgtaagatcatgacccaacaaatcacttctgagcagaaagaaaagagtggc
tggacccaatctttactgcaaacctacagtgagcatgtggacacaaactcaaagttgatc
caggaagcccagaatgccatagaagagccagagatggcttcttttgtccagatctcaaaa
gatcttattgtgaaggttggtgaagcatctaattgcttcactctggagaccctggatcct
gattatgagaacatgaatcactacaaagtggatttcgatgcagaagagagagttctgcac
cagatggatttcttggagattgaagaagaggtggaggaaacgcccgatgaacaagagtca
gaacctgaatctgaacccgaaccagttctgacaccagaacctgaccctgaaccagatcag
gatctgaaatcagaggcttctgagatgacaaatccaacaccggagacaccggagacaccg
gaggacaattgggaacaagaaggtggctgtggagacatcagaaaagaggctgtttgtgag
aagaatagcttaagcacttcacaggttgtcactctagccctttatttcctggcctttctg
gtcatcctacagcgaatatggggaagcattcagtgccttacttgtatatag
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