Rhinichthys klamathensis goyatoka (western speckled dace): 130072913
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Entry
130072913 CDS
T09701
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130072913 (tfip11)
Spliceosome [BR:
rkg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130072913 (tfip11)
Other components
Complex C specific factors
130072913 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130072913
NCBI-ProteinID:
XP_056094216
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MSMSHLYGRRGEEEEDGVEIEKFEVTEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSDD
ERPSFGGKRAKDYSAPVNFVSGGIRKTAAEEKAEKEGSDDSNDSGDAPPPPPRTAVPKKL
QTGGSFKTSQRFAGGIRTGQDLGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKLRKGKGAVGAYGNERTQQSLQDFPVIDSEEEEEQEFQRELGQWRKDPGTTKKKPRYSY
KSVEELKAHGKLANKSMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLSV
TAREQKSTGFALPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHESDALQVRLAE
EEESLGRLEQVMNLVESFEAGDMEGSSALSLQECAKVFQQLQTEFYQEYKTLGLGDLAVS
VVHPLLKEKLRSWDPLKDCSDGLEEVGQWRAILESSQSLHGGPDTSNMDHYHRLIWEVWV
PVMRTCVSQWQPRNVGPMVDCVECWAPVLPLWILDNVLEQLIFPRLQREVDNWNPLTDTV
PIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWREVFTPGAWEA
FMVKNIVPKLALCLGELVVNPHQQLLEPFNWVMDWEGMLSVSSMVGLLDKNFFPKWLQVL
CSWLSNNPNYEEITKWYLGWKSLFSENLLSHPLVKEKLNEALDIMNRAVATGLGGYMQPG
ARENIAYLIQTERRKDFQCEALPERREVDNSATRPPGTAAVPTAVPTNFKDLVQAKAEEN
GIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtgaggaggaggaggatggtgtggaaatt
gaaaagtttgaggtgactgagtgggacttggccaatgagttcaacccagacagacgcaga
cacagacagactaaagaagaagcgacttatgggatttgggcagagcatgactctgatgat
gagcggcccagctttggggggaaaagagcaaaagactattcagctcctgtgaactttgtg
agtggtggcatacgaaagactgcagctgaggagaaagcggagaaggagggttcagatgac
tccaatgacagtggagatgcaccacctcctccacctcgcactgcagttcccaaaaagctc
caaacgggtgggagctttaagacatcccagaggtttgcaggcggtattagaacaggccag
gacctgggatcctgggagaaacacacacgaggcattggtcaaaaacttctgcagaagatg
ggttacgttccaggaaaaggattgggcaaaaatgctcagggtattgtgaatcctattgaa
gctaagctgcggaaggggaagggagcagttggtgcatatggtaatgagaggacccagcag
tccctgcaggatttccctgttatagactctgaggaagaggaggagcaagaatttcagaga
gagttggggcaatggcgtaaagacccgggaacgacaaagaaaaagcccagatattcttac
aagtctgtggaagagctgaaagctcatggcaaactggccaacaagagcatgagcagaccc
gctggagaacttgctcaggtcaaggtgatcgatatgacgggcagagagcagaaggtgtat
catagctacagtcatatgagtcagaagcacagtgttcctgaggaggcgcctttgagcgta
accgcgcgagagcagaagagcactggcttcgctctcccggagctggaacacaacctcaaa
ctgctcattgagctcacagagcaagacatcctacagagtgcacgacgtctgcagcatgag
aaggacactgtggtgaccctgacccatgagagcgacgccctgcaggtccggctggcagag
gaggaagagtctcttggtcggctagagcaggtgatgaacctagtggagagctttgaagca
ggcgatatggagggaagctctgcgcttagccttcaggagtgtgcgaaggtcttccagcag
ctgcagacagagttctatcaggaatataagactttgggtttgggagatctagctgtgtct
gttgtgcatcctctattgaaagagaagcttcgcagctgggatccactgaaggactgttca
gatggtttagaggaagtcggtcaatggagggccattcttgaaagctcacaatctcttcac
ggtggaccagacacttctaacatggaccactatcacaggttgatatgggaagtgtgggtt
ccagtcatgaggacctgtgtgtcgcagtggcagcccagaaatgtggggcccatggtggac
tgtgtggaatgctgggctcctgtattaccgctgtggattctggacaatgttttggagcag
cttattttcccacgactacagagagaggtggacaactggaacccactgaccgacacagtg
ccaatccattcatggattcatccctggctacccctgatgcaaacccgtcttgagccgctg
tacgcccccatccgcagcaaactagcccatgctttgcaacgctggcaccccagcgactcc
tctgccagactcattctgcaaccctggagggaggtcttcacacctggggcctgggaggcc
ttcatggtcaaaaatatcgtccccaaactggctctatgtttaggagagctggtggtgaat
cctcatcagcaactgctggagccgttcaactgggtgatggactgggaggggatgctctcg
gtctcctccatggttggattgctggataagaatttcttccccaaatggctacaggtgttg
tgttcctggctcagcaacaacccgaactatgaggagatcactaaatggtatcttggctgg
aagagcttattctcagagaacctgctcagtcacccattggtcaaagaaaaactgaacgag
gcccttgatattatgaaccgtgccgtagccactggactaggtggctatatgcaacctgga
gcaagagagaacattgcatatctgattcagacggagagaaggaaagatttccagtgcgag
gctctgcctgagcgccgtgaagtggacaattctgccacacgcccaccaggcaccgcagcg
gtaccaacagctgtacctaccaactttaaagatctagtccaggccaaggctgaggagaac
ggcatcgtcttcatgccactggtagccaagcggcatatgggaaaacagttgttcacattc
ggcagaatagtcatctacattgagcgtggagtggtctttgtgcaaggcgagaaaacctgg
gttccaacatcactacagagtctaattgacatggccaaatga
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