Rhinichthys klamathensis goyatoka (western speckled dace): 130072923
Help
Entry
130072923 CDS
T09701
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130072923
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130072923
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
SALM family
130072923
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130072923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
LRR_5
Ig_2
LRR_9
fn3
LRRCT
Motif
Other DBs
NCBI-GeneID:
130072923
NCBI-ProteinID:
XP_056094221
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MNDIFLFLLFLGLWITPLSTMQDSPPLQPFRKPHPSHILCHPHKNTHSPSFPSHPSIHLK
QNILKPSEAFRQPSRPLWPKLTSRYSPPDTSSLTLPLPFLHWLALFTCACLLPVLFGQIP
GAVAGETWGVVSACPFHCVCRNLSESLSTLCADKGLLFVPPNIDRRTVELRLADNFIREV
GGADFANMTGLVDLTLSRNTISHIRPLAFADLESLRSLHLDGNRLSVLGPRDLAGMLNLQ
HLIVNNNQLINISSEAFDDFLLTLEDLDLSYNNLRKAPWDAIQSMSSLHTLNLDHNLIDQ
IAEGSFSELYKLARLDMTSNRLQTLPPDQLFARSQTGVISPTPYNAVINLNFGGNPLHCN
CELLWLRRLIRSDDMETCATPLHLAGRYFWSIPEEEFACEPPLITRHTHKLWVLEGQRAT
LKCRAIGDPEPVVHWVSPDDRIIGNSSRTTSFRNGTLELLVTVARDDGTYTCIAINAAGE
ATSLVDLKVIPLPHRGNGTVLLTRDPGSSDITRGKTSSGQSPSLDTNSDPQEGLEEGQAE
GEDVVSEGGEEQMVKVQGVTSTSAQVRWEKGRLMAANLVWMFQIQYNCTADETLIYRILP
PTSDSFLLKNLVSGSDYNLCVLSIFDDTVTSMAATKVLGCTQFSTKDNYPDCRSLQAHFL
GGTLTILVGGVVVVTLLVFTVALMVRHRVCSNHDIHHEIGEEVGCSGTDSPSLPAKGADV
FSQSNGNGNVMMVVLPNGLVQKRKVAEGGLGSQPKPTSKVKPKTLPKPKVNLEQFRAGLE
VEMGSVRPLPPYTLEKEQMSLYYTPSNHSASTLPRPSRQVGAKPLKFRPTNMNTSKRASL
SLAPPNKYSCDRRFSTGGGIVVCRGGPESQWNSSLAYQSPSLSRERPPHRALRYKRSSSF
DMGEIATSACYSYAKRFSVIWTKRSQSLHGMLVQCTSATSTSTTSSGSEDFHAQHTRGYI
RAYSATNSNSNPPKAEVTTNSKNQRLKYKEKDKEKGEELEESVV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatctttctctttctgctttttctaggtctgtggatcactcccctatctacc
atgcaagactccccaccccttcagccattcagaaaaccacatccgtcccacattttatgc
catcctcacaagaacacacattccccctcattcccctctcatccgtccatccatctgaaa
caaaatatcctcaagccctctgaagcatttcgccaaccctctcgtccgctgtggccaaag
ttaaccagcagatactcacccccagacacatcctcactgacactgccactgccattcctg
cactggctggcactgttcacttgtgcctgtttgctgcctgttctttttggtcagattcca
ggagccgttgccggtgagacgtggggcgtagtctctgcatgtcccttccactgcgtctgc
aggaatctctcggaatctctaagtacactttgtgccgacaaagggcttcttttcgtcccg
ccaaacattgaccggcgaaccgttgagcttcgtcttgctgacaacttcattcgagaagtg
ggaggagctgactttgccaacatgacaggactggtggatttgacactatcccggaatacc
atcagtcacatccggccactggcatttgcagatctggaaagtcttcgatcattgcactta
gatggcaatcgactttccgtgctgggcccacgagacttagcaggaatgctaaacctgcaa
catcttattgtcaacaacaaccaactcatcaatatctcctcggaggcctttgatgacttt
ttactcactctagaggacttggacttatcctataacaatctgcgcaaggctccctgggat
gccattcagagcatgtccagtctgcacacgttaaacctagatcacaatctcattgaccag
atcgctgaggggtcttttagtgagctctacaaactagcccgattggacatgacctccaat
cgcctacagactttaccacccgatcagttgttcgctcgctcccaaacaggggtaatcagt
cctacaccttacaatgctgtgatcaacttgaatttcgggggtaacccattacactgcaac
tgtgaactgctttggttgaggaggctaatccgcagtgatgatatggagacgtgtgctaca
ccccttcatttagcgggacgttacttctggtctattcctgaggaggaatttgcctgtgag
cctccgcttattacccgacatacacacaaactctgggttttagagggtcaaagggcaaca
ctcaaatgtcgtgctattggtgatccagagccagtggtgcactgggtctcaccagatgac
cgcatcatcggcaattccagtcgcaccacatctttccgaaatggcactcttgagctactt
gtgactgttgctcgtgatgatggtacgtacacttgcattgctatcaatgctgcaggtgag
gccacctcgctagttgacctgaaggttatcccactccctcatcgtggaaatggaacggta
ttgttaactcgtgacccaggatcatcggacatcaccagagggaagacctccagtgggcaa
agcccaagcctggacactaacagtgacccccaggagggactggaggagggtcaggcagag
ggtgaggatgtggtcagcgaagggggtgaggagcagatggtgaaagtacaaggagtgact
tccacctcggcacaagtgagatgggaaaagggtcgtctaatggcagccaacctggtgtgg
atgtttcaaatacagtataactgcactgcagatgagacactaatttacaggattctcccc
cccacgagtgacagcttcctactgaaaaacttggtctctggctcagactacaatttgtgc
gttctctccatttttgatgacacggtcacttccatggccgccacaaaggtccttggttgc
acacagtttagcaccaaggacaattacccagactgtcgttcgcttcaagcccacttcctt
ggcgggactcttaccattctggttggtggagttgttgtggtaacactgttggtgtttacc
gtggcactgatggtacgtcaccgtgtgtgcagtaaccatgatattcatcacgaaatagga
gaagaggtgggatgctcaggaacagactccccatctcttcctgctaagggagctgatgtc
ttttctcagagtaatggaaatgggaatgtgatgatggtggtgttgcccaacgggctcgtt
caaaaacgaaaagtggcagagggggggttggggtcacagcccaaaccaacttccaaagta
aaaccaaaaaccctcccaaagcccaaagtgaatctggagcagtttagggcaggactagaa
gtcgaaatgggttccgtcagacctctcccaccgtacacactggagaaagagcaaatgtct
ttgtattatacccccagtaatcattctgcctccacactgccgcgtccgtcacgccaagta
ggagcgaaaccactcaaattccgacctaccaacatgaacacaagtaaacgggccagttta
agcttggccccgcccaataagtacagttgtgacaggcggttcagcacgggaggaggcatt
gtagtctgtcggggaggtccagagagccaatggaattcctcactggcctatcagagccct
tcgttgtctcgcgagaggcctcctcatagagccctgcgctacaagagaagctcttcattc
gacatgggtgaaatcgccacgtcagcctgctatagttatgccaagagatttagtgtaatc
tggaccaaacggagccagtcgttacatggcatgcttgtccagtgcacttcagcaacaagc
acctcaacaaccagcagtggcagtgaagatttccacgcacagcacacacgcggatacatc
cgtgcctacagcgccaccaattcgaattccaaccctccgaaagcagaggttacaacaaat
tcaaagaaccagcggctgaagtataaagaaaaggacaaagaaaagggagaagaacttgag
gagagtgtggtgtag
DBGET
integrated database retrieval system
