Rhinichthys klamathensis goyatoka (western speckled dace): 130072946
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Entry
130072946 CDS
T09701
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130072946 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130072946 (dtx1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130072946 (dtx1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130072946 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
WWE_5
zf-RING_Vps41
zf-RING_2
zf-RING_5
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
Motif
Other DBs
NCBI-GeneID:
130072946
NCBI-ProteinID:
XP_056094257
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MARPGSGVLVSLGGGYSSQSMARVVVWEWMNEHGRWRPYSATVCHHIENVLKGDARGTVI
LGQVDPQLAPYVIDLQSMHQFRQDTGTMRPVQRNFYDPSSSPGKGIVWEWENDCGSWTPY
DMELCVSIQNAYEKQHPWLDLSSLGFCYLVDFDGMSQTNRQSQRKRRIRRRMDLAYPLIA
GSIPKSQSWPVGTNSGTPCTCQQCMLVHSTRAASNAILALQQRRRLYGADPATAVVRQSN
TFAGSSLWSPTTTVARGHHNNIKVGGGGGGKMEMNGGSFSCVPALVTLPTNHTLTINGQN
NLNRPGTQRITVTTSRGSIPPGVPALPVKNLTGPGPVHPALAGMTGILLCAAGLPVCLTR
APKPVLHPPALNKSDIKPVPGINSIRRKTKKKHLRKGKNPEDVVRRYTEKVKAAPDEDCT
ICMERLATASGYEGVLNNKAIKPELVGKLGKCGHMYHLLCLVAMYNNGNKDGSLQCPTCK
AIYGEKTGTQPPGKMEYHVIPHSLPGHSDTKTIRIVYDIPAGIQTTEHPNPGKKFSARGF
PRHCYLPDNEKGRKVLKLLIVAWDRRLIFTIGTSSTTGETDTVVWNEVHHKTEFGTNLTG
HGYPDPNYLDNVMRELSAQGVGEDNLKD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacccggctccggggttctggtgtcgctgggaggaggatactcgtctcagagc
atggcacgggtggtggtttgggaatggatgaacgaacacggccgatggaggccgtacagc
gccaccgtttgtcatcacatcgaaaacgtcctgaagggagacgctcgtgggaccgtcata
ctgggacaggtggatccgcagctcgcgccgtacgtcattgacctgcagtccatgcatcag
ttcagacaagacacgggcacaatgcgtcccgtccagcgcaatttctacgacccgtcctcg
tctccgggaaagggcatcgtgtgggaatgggaaaacgactgtggatcctggactccttat
gacatggagttgtgcgtgagcatccagaacgcgtacgagaagcagcacccctggctggac
ctgagctcgctgggcttctgctacctggtggacttcgacgggatgtcccaaaccaaccgg
cagagtcagagaaagcggcgcattcgtcggcggatggacctcgcgtatccgctaatcgcc
ggatcaatccccaaatcccagtcctggcccgtgggcaccaactcgggaaccccgtgcaca
tgccagcaatgcatgctggtccacagcacacgggccgcgtcaaacgccatcttggctctg
caacagagacggcgactctacggggcggacccggcgactgcggtcgtcaggcagagcaac
accttcgctggctcctccctctggtcgcccacgacgactgttgctaggggacaccataac
aacataaaggtcggtggaggtggaggtgggaagatggagatgaacggggggagtttctcg
tgtgttcctgcgctcgtgacgcttcccaccaatcacacgcttactattaacggccagaat
aatctgaaccggccgggaacgcagcggatcacggtgacgacgagcagaggatccattccc
ccaggggttcctgcactccctgtgaagaatctcactggaccgggacccgtccacccggcc
ctagcaggaatgacggggatcctgctgtgcgcggccggcctcccggtgtgtttgacccgc
gcccctaaacccgtcctgcacccgccagcgctcaacaagagcgacatcaaaccagtgccg
ggaatcaacagcatccgacgcaagaccaagaagaagcacctgcgcaaaggtaaaaacccc
gaggatgtcgttcgccggtacacggagaaagtcaaagcggctccagacgaggattgcacg
atctgcatggagagactggccacagcgtccggatacgagggagtgctcaacaacaaggcc
atcaaacccgaactggtcggcaaactgggaaagtgtggccacatgtaccatctcctgtgt
ctggtggccatgtacaacaatggcaataaggatggcagtctgcagtgtcccacctgtaag
gccatctacggggagaagaccggcacacagcctcctgggaagatggagtatcacgtcatc
cctcattccctgccgggacactccgacaccaagaccatccgcatcgtctacgacattcct
gcgggaatacagaccacggagcatcccaatcctgggaagaagttcagcgcgcggggattc
cctcgacactgctacttaccagacaacgagaagggccggaaggtgttgaagttgctgatc
gtggcgtgggaccggcgactgatcttcaccatcgggacgtccagcaccacaggagagacg
gatacggtcgtgtggaacgaggttcaccacaagaccgagttcgggaccaacctgacgggc
cacggataccccgaccccaactatctggacaacgtgatgagagaactgagcgctcagggc
gtcggagaggacaacctgaaggactga
DBGET
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