Rhinichthys klamathensis goyatoka (western speckled dace): 130072951
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Entry
130072951 CDS
T09701
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130072951 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130072951 (dmxl1)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130072951 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
130072951 (dmxl1)
RAVE complex
130072951 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_SPT8
NBCH_WD40
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
130072951
NCBI-ProteinID:
XP_056094262
LinkDB
All DBs
Position
Unknown
AA seq
2901 aa
AA seq
DB search
MNLHQVLTGAVNPGENCYSVGNISNQPFTAYASGCDIVILGSDFERVQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGNMICVFEPVEVSPQGKAQKQKLNYHWQKSGQFVLQSVAQILAW
HPTGTCLLTGSTSLQLWCNVCVSADPEDEAVGPQRSWRSIWQCKSAASTHFIKFSPDGEF
FATAGQDDCLVKVWYSTSKWQADVTKLFTPLDLRSEINFSFIYLAHPRSVTGFSWRKTSK
HMPRGVVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHNHCNNDKTNNMKKSSSNTLSQ
SPMELNLKPSWREEVRSLSQLSYTGPLPQQQNKHYTHRANITHANALCHFHIAASINPAT
DIPLLPSISAMSGADEEEPGGSFTVHWLNNKELHLTLSMEVFLQQLRSRDEPNGPAEPYD
VDEEASGAYAVAVDHQVDVLLGDWTRGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQA
QVSFVSRIPVAFPTGDANSLSRSVVMYACNKNVDLAIQHGRQRPAGLTHSSSALISQSKP
SSNSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSGFSTVLSVSHQSRYCGHRFHLNDL
ACHSLLPLLLTTSHHNALRTPDADLTRPPDPARRSRASSGGVSQDPNAVYSELILWRVDP
VGPLSFSGGVSELARINSLHASAFANVAWLPALIPSNCLGVYGNSPSACFIASDGHSLRL
YQAIIEAKKLLSELSNPDISKYVSEVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHV
FEEDLILGNEKIDDCLQDSVPSRTLFSARFFLVVVEMSENARSLLHMWHLQLDAVPVIME
QTQTPAESESVSPSPTDCSQFNFETAGSPHVQRARLGTSNLQSACRLALTRRKVFSQELG
VPPGVEVMRATPAAGHLSSSSLQPAGRAPYLLATSCSDGSVRFWRCSAVSDPDSSGEPAY
IWEEWPLLVEDGVASTSALSVSGQIMGLSCCHTSRVAVAHQNNGSGSAEPLMNVSIFQCD
STGGSQWMLEQILKVSGSYSPSSNDCDKSLMVLRDGLLNNDCLVVGGKRQVHLDWVSRED
GSHILTVALGSKLYMYGLLSGKPPDLGLSDSSREHHCSRLVLLRVVDLVSSVEGSLPIPV
SLSWVRDGILVVGMDCEMHVYSQWQPALTTGESSVGTGSVTSLKQEGLSPNPSKKALTRS
MTSLAQKLSGKRTVYDLPAEMEDSGLFEAAHHLFPTLPQYHPVQLLELMDLGKMRRAKAI
LSHLVKCIAGEIVSLKDTTVSQERRLRSLTISASGSTTRDPKMFSKGESSDYTEIDSIPP
LPLYALLAADDETAPSAKERTDSVSAHGASTSSQSVAYDELFSSPGVSADDMDPFDADEE
DASAKVIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMALADTIASTSTDIG
ESQGKGKGGETLDECGLKFLLAVRLHTFLLTSLPPAHRAQLSCQGLSTCHYAWAFHSEAE
EELLNMLPALQKADPTWPELRAMGVGWWLRSTNKLRRCIEKVAKAAFQRNNDPLDAALFY
LAMKKKAVVWGLYRSHQNSKMTTFFSNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLL
AGSLKDAVEVCIEKMQDLQLALVICRLYESEFEMSCTYKRILQRHVLGYDHQMAPHQDPF
LRSMAFWVLDDYSRALDTLLEQPNEGAAGSSPCNPEVFNFYTFLRSHPLLLRRHFGSSEK
PRVCLPVEGREVDSISLTERRLFFTAAHTHLQAGCPMLALEVLSKMPKVVKRSKARENRP
VSWSASEGLEKQDWSQPVLNGFQSVSSLSSPREDSHSDSVLSFDWSQPSLALQDEPLEMK
WDSDESDVEESGLAMKTIHPENSGDAPVSASTPTDRGDSPALTEDILAARLKFSSCLKIL
SSELRTLSTGYELDGGKLRHQLCHWLEREVSALQSVCGYNPFLQTPPEGISSDPSRREDP
GREDQRRRRLWLKRNQPLLRIFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGLQISV
PAPQNVNVPLLLAWTANSKTVVANPIVHLTNLTHDLLHTINALDAPPQPDVVNNEIFVMH
TLAASLSACIYQCLCDGHSYSHVNPFTGITYQSVLITHQPPVRSVSMEEPVLPNTAPAQW
PGVSVLMRLLEASSDENQPGLSVLLCEILSAVFLSLFVHGLATHSTHELLRIVAHPLNAK
LWVAVFGGGARVPVPEKPTSPTATDARDPVDDAERQQRRFRIPSSRSNSRETPDAPDAPR
PATQPQRERFIPPELSIWDYFIAKPYLPPSASREEYDSEESQGSEDEDEDDEDEGDCFDA
NSPLAEHSNSNSYSWCLMRLAMVQMVQFNLKTFYPTTGHDLLDLPVCSPLCHAALKTLQR
WETLLLKRLEIFGGPPSKFISSQLLDESVSSGPALLRHKALFEPSNTPFRSRRRSALPVK
RLWQYLVKQEEVQETFIRNIFTKKRDLNEETDSALLDSTHNQIEADLGYPGGKARIIHKE
SDIITAFAINKANRNCLVIASTHDIQELDVSSILATQVLTWIDDEAEAEVKGTDDFLVVH
ARDDFSTHSSTPYTHSSPGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYYL
TGAQDGSVRMFEWGHSQQITCFRSPGNTRVTRIRFNYQGNKFGIVDADGALSLWQTSTSG
HTHKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPAFSLVHAFSVH
ETGSTVLALASKQQVLLSGGRKGWISVLDLSLKVQRQSFQAHDSPVKALAVDNTERSFIS
GSAEGNIKVWSMSTQTLLHSFASEHARQSLFRNLGTGVMQIETAPANQVFSCGADGTMKM
RVLPDATSACGTARNDVKFIM
NT seq
8706 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaccaggtgctcacaggtgccgtcaaccccggagaaaactgctactctgtg
ggaaacatcagcaaccagccgttcacggcgtacgcctccggatgtgacatcgtgattctg
ggcagcgactttgaaagagtccagatcatcccaggagccaaacatgggaacattcaggtg
gggtgtgtggactgctctctgcaggggggacagatcgcggcttcgtacggaaacatgatc
tgtgtgtttgagccggtggaggtcagtccgcaagggaaagcacagaaacagaagctgaac
tatcattggcagaagagcgggcagttcgtcctgcagtccgtcgcacagatcctggcgtgg
cacccgaccggtacgtgtctcctgacgggctcgacgagtcttcagctgtggtgtaacgtg
tgtgtcagtgcagatcctgaagatgaggccgtgggtcctcagcgctcctggagaagcata
tggcaatgcaagtccgccgcttcgactcacttcatcaagttttcccctgacggagagttt
tttgcgaccgcaggacaggacgactgtttggtgaaagtgtggtacagcaccagcaaatgg
caggcggacgtcaccaagctcttcaccccgctcgacctgcgctccgagatcaacttctcc
ttcatttacctggctcaccctcgctccgtcaccggcttctcctggaggaagaccagcaaa
cacatgcccagaggagtggtgtgtaacgtgctgctgacctgctgcaaggacagtgtgtgt
cgactgtgggccgaaacgcttctgcccagcgactgcctgctgtccggactcagacacaac
cactgcaacaacgacaagaccaacaacatgaagaagtcgtccagcaacaccctgagccag
agcccgatggagctgaacctgaagccgtcgtggagagaggaggtgaggagtttatctcag
ctctcgtacaccggtcctcttccacagcagcagaacaaacactacacacaccgtgccaac
atcacgcacgccaacgccctgtgccacttccacatcgctgccagcatcaacccagccaca
gacatccctctgctgccctccatctcggccatgagcggcgcggatgaggaggaaccgggc
ggctccttcaccgtccactggctcaacaacaaggagctgcacctgacgctgagcatggag
gtgttcctgcagcagctgcggagccgagacgagccgaacggccccgctgagccatacgat
gtggacgaggaggcgagcggcgcgtatgctgtcgctgtggatcatcaggtggatgttctg
ctgggagactggacccgaggagcggatatgctgttcagcatacacccgatggacggctcg
ctgctcgtgtggcacgtcgactggctggacgagtaccagccgggcatgttccgacaggca
caggtgtccttcgtgtccagaattcccgtggccttccccaccggtgacgccaactcgctc
agccgcagcgtggtcatgtacgcctgcaacaaaaacgtggacctggcgatccagcacggg
cgtcagcggcccgcgggtctcacacactcgtcctcggcgctgatcagtcagagcaaaccc
tcgtccaacagcctgcgcctcagcatcttcacccccagcgtcctgatgatctccaaacac
gccgacggatccctcaaccagtgggccgtcagcttcgccgaggactcgggcttctccacg
gtgctcagcgtgtcccatcagtcccggtactgtggccaccgcttccacctgaacgacctg
gcctgccactcgctgctgccgctactgctaaccacgtctcaccacaacgccctgaggaca
cctgacgctgatctgacccggccgccggacccggcccgcaggagccgagcgtcatccgga
ggcgtctcgcaggaccctaacgccgtctacagcgagctgatcctgtggcgcgtggatccg
gtgggaccgctgtcgttctcgggaggcgtgtcggagctggcaaggataaactcgctgcac
gcgtcggccttcgctaacgtggcctggctgcccgcgctcatccccagcaactgcctcggt
gtgtatggaaactcacccagcgcctgcttcatcgccagcgacggacactcgctgagactg
tatcaggccatcatagaggccaagaaactgctgagtgaactctccaaccccgacatctcc
aaatacgtcagcgaggtgtttaacatcatcagccagcagtcgacggccaaacccggctgc
atcatcgagctcgacgccatcactgactttcaggggaaagagacgcagctgttgcacgtg
tttgaggaggacctgatcttgggaaatgagaagatagacgattgcctgcaggattctgtt
cccagccggacgctgttctccgctcgcttcttcctggttgtggtggagatgtcggagaac
gccagatcactcctgcacatgtggcatcttcagttagacgccgttcccgtcattatggag
caaactcaaactcctgcagagagcgagagtgtgtctccatcacccacagactgctcccag
tttaactttgagacggccggctcaccgcatgtccagagagcgagactcggcacgtccaac
ctccagagcgcctgccgcctcgcgctgacccgcaggaaggtgttcagccaggagctgggc
gtgcccccgggtgtggaggtcatgcgagcgactcctgctgcaggacatttgagctcttcg
tctctgcagccggctggacgggctccgtatctgctggccacgtcgtgctctgacggatcg
gtccggttctggaggtgcagcgctgtctctgaccccgatagctctggagaaccggcgtac
atctgggaggagtggcctttgttagtggaggacggcgtggctagcactagcgctctgagc
gtgagcggtcagataatgggtctcagttgctgccacaccagcagagtcgccgtagcgcac
cagaacaacggatccggctctgccgagccactcatgaacgtgagcatattccagtgcgac
tccaccggcggctcccagtggatgctggaacagatcctgaaggtcagcggctcgtacagc
ccgagtagtaatgactgcgataaaagcctgatggtcctgagggatggcttgttaaataat
gattgcttagttgtcggtgggaagaggcaggtccacttagactgggtttccagagaagac
ggttctcatatattaaccgttgctctgggatccaaactttacatgtacgggttgctttcg
ggaaaacctccagatctgggcctgtccgacagcagcagggagcaccactgctcccgcctg
gttctgctcagagtggtggatctagtgtcgtccgttgagggttcgctacccattcctgtc
tcgctgtcttgggtgcgagatgggatcttagtagtcgggatggactgtgagatgcacgtc
tattcccaatggcagccggcgctcaccaccggagagagcagcgtcggtaccggcagcgtg
acgtctctgaaacaggagggactcagcccgaatccttctaaaaaggctctcaccaggtcc
atgactagtttggcacagaagctcagtggaaagagaaccgtgtacgacctgccagctgag
atggaggactctgggctgttcgaggcggcgcaccaccttttccccaccctgccccagtat
catccggtgcagctgttggagctcatggacctgggaaagatgcggcgggccaaagccatc
ctttcccatcttgtaaagtgcatcgccggagagatcgtgtccctgaaggacaccactgtc
agccaggagcgccgtctgcgctcgctcacgattagcgccagcggaagcaccaccagagac
ccaaagatgttcagcaagggcgagagctcggactacaccgagatcgactctatcccgccg
ctgccgctgtatgcgctgttagccgccgatgacgaaacggcccccagtgccaaagaaaga
acggacagtgtgagcgctcacggcgccagtacatccagccagagtgtcgcttacgatgag
ctcttctcgagccccggcgtcagtgcggatgacatggacccatttgatgcagacgaggaa
gatgctagcgctaaagtcattgatctgtcgaagtacagccccacgtttttcggctccgag
cacgcacaggtgctgtccggacacctgcttcactccagtctgccgggcctgacccggatg
gagcagatgtctctgatggccttggcagacaccatcgcctccaccagcaccgacattgga
gagagtcaaggaaaaggcaaaggtggagagacactggatgaatgcggactgaagttcctg
ctggccgttcgcctgcacaccttcctcctgacgtctctgcccccggctcatcgagctcag
ctttcctgccaaggactgtccacctgccactacgcctgggcgttccactccgaggctgag
gaggagctgctcaacatgctcccggcgctgcagaaagcagaccccacctggccggagctg
cgggccatgggcgtgggctggtggctgcgcagcaccaataaacttcgcagatgcattgag
aaggtagcaaaagctgcttttcagagaaacaacgacccgttagacgcagccttgttttat
ctggccatgaagaagaaagctgtggtttggggactgtacaggtctcaccagaactcaaag
atgaccacgttcttcagcaataacttcagtgaagatcgctggaggaaagcggctctgaag
aacgctttctctctgctcggaaaacagcgcttccagcattctgccgctttctttctgctg
gctggatccctgaaagatgctgttgaggtttgtatagagaagatgcaggaccttcagctg
gctctggtcatctgtcgactgtacgagtctgagttcgagatgtcctgcacctacaaacga
atcctgcagaggcacgtgttgggttatgaccaccagatggcgccgcaccaggacccgttc
ttgcgcagcatggcattctgggtattagacgactacagcagggcactggacactctgctg
gagcagcccaatgaaggagccgccggctcatctccctgtaaccctgaggtgtttaacttc
tacacgttcctgcgctcgcacccgctgctcctgcgccggcacttcggctcctcggagaag
cctcgagtgtgtctgccggtcgaggggcgtgaggtcgactccatcagcctcaccgagagg
aggctcttcttcaccgcagcacacacacacctgcaggccggctgccccatgctggcgcta
gaggtgctctccaaaatgccgaaagttgtgaagcgctcgaaggcgcgagagaaccggccc
gtgtcgtggagcgcctctgaaggcctggagaagcaggactggtctcagccggttctcaac
ggcttccagtcggtgtcctcgctctcgtctcccagagaggacagtcattcggactcggtt
ctgagcttcgactggagccagccctccctcgctctgcaggacgagcctctcgagatgaag
tgggactccgacgagtcggacgtggaagagtcaggcctggcgatgaagaccattcacccg
gagaacagcggagacgctccggtctcggcctccaccccgacggaccgtggggattctccc
gccctgaccgaggacatcctcgcggcccggctgaagttcagctcctgcctgaagatcctg
agctcggagttacggactctctccacgggctacgagctggacggagggaagctgaggcat
cagctgtgccactggctggagcgcgaggtgtcggccctgcagagcgtctgcgggtacaac
ccgttcctccagaccccgcccgagggcatctcctcggacccgagccggcgggaggatccg
ggtcgggaggaccagcgccggcggaggctctggctgaagaggaaccagcccttgctccgc
atcttcctcagttactgcagcctccacggctctcacggaggaggactggcctccgtcagg
atggagctcattctgctcctgcaggagtcccagcaggacgatggtctgcagatctcggtt
cccgctccgcagaacgtcaatgttcctcttcttcttgcatggaccgccaactccaaaact
gtggtggccaatcccatagtgcacctcaccaatctgacccatgacctcctgcacaccatc
aacgctctcgacgcacctccgcaaccggacgtcgtcaacaacgagatcttcgtgatgcac
acgctggcagcttctctgtcggcctgcatttatcagtgtctctgcgacggacacagttac
agccatgtaaacccgttcacgggcatcacgtaccagagcgtcctgattacccatcagccc
ccggtgaggagcgtcagcatggaggagcccgtcctgcccaacactgctcctgcgcagtgg
cccggtgtgagcgtcctgatgcggctgctggaagcctcctctgatgagaaccagcccggt
ctctcagtgcttctgtgtgagatcctgagcgctgtgttcctcagcctgttcgtccacggc
ttggccacacactccacacacgagctgctccgcatcgtcgcgcacccgctcaacgctaag
ctctgggtcgccgtgttcggcggcggcgctcgagttcccgtgccggagaaacccacatca
cccacagctactgacgctcgtgatccagtggacgatgcggagcgccagcagaggcgcttc
aggattccctcatcccgcagtaactcccgagagactcccgacgctcccgacgctcccaga
cccgcgacgcagccgcaaagagagcgcttcatcccgccggagctcagcatctgggactac
ttcatcgcaaagccgtacctgcctccgtccgccagccgagaggaatacgactctgaggaa
agccaaggcagcgaggacgaggatgaggatgatgaggatgaaggagattgttttgatgcc
aactctccactggcagaacattccaacagtaactcgtacagctggtgtctgatgcgcttg
gctatggtgcagatggtgcagttcaacctcaagaccttctacccaacgacaggtcacgac
ctcttagatctgcccgtgtgctcgccgctgtgtcacgcggctctgaagacgcttcagcga
tgggagacgctgctcctcaagaggctggagatcttcggaggtcctccatcaaagttcatc
tcctcgcagctcctggacgagagtgtgtcgtcgggaccggcgctcctgcggcacaaggcc
ctgttcgagccctcaaacacacccttcaggtcccgccggcgctcggctctgcccgtgaaa
cgactctggcagtatctggtcaaacaggaggaggttcaggaaacgttcatacgaaacatc
ttcactaagaaacgagatctgaatgaggagactgacagtgcgctgctggattccacacac
aaccagatcgaggcggatctgggatatccaggaggaaaagctcgcatcatccacaaggag
tctgacatcatcacggcgttcgccatcaataaggccaatcgcaactgtttagtgatcgcc
tccacacacgacatccaggagctggacgtgtcctccatcctcgccacacaggtgctcacg
tggatcgacgacgaggcggaggccgaggtcaaagggacggatgatttcctggtggttcac
gcgcgggacgacttcagcacgcacagcagcacaccgtacacacacagcagccccgggacg
cccatcaacatgccctggctgggcggcctgcagaccggcagaggagccgccgtgctcatc
aagcgaaacattaacaacgtgagacggatgacatcacaccccacactcccgtactacctg
acgggggctcaggacggcagcgtgcgcatgttcgagtggggtcactcacagcagatcacc
tgcttcaggagtcccgggaacaccagggtcaccagaatacgcttcaattaccagggcaat
aagtttgggatcgtggatgcggacggagcgctcagcctctggcagaccagcacttcagga
cacacacacaaaccctatctgacgcttcagtgtcacaataagacggcgaatgactttgtg
tttgtgggctcgtcgtctctcatcgccaccgctggcctgtcgacagacaacaggaacgtg
tgtctgtgggatacgctggtcacgccggcgttcagtctggttcacgccttcagcgtgcac
gagacgggctccacggttctggctctggcctctaaacagcaggttctgctcagcggaggg
aggaagggttggatcagtgttctggatctgagtctgaaggtccagcgccagagtttccag
gcccacgactcgccggtgaaagcgctggccgtggacaacaccgagagaagcttcatcagc
ggatccgccgaggggaacatcaaggtgtggagcatgtcgacccagacgctcctgcacagc
ttcgccagcgaacacgccagacagtcgctcttccggaacctcggcacgggcgttatgcag
atcgagacggcgccggccaatcaggtgttctcctgcggcgccgacggcaccatgaagatg
cgcgttctccccgacgccacgagcgcgtgcggcaccgcgaggaacgacgtcaagtttatc
atgtag
DBGET
integrated database retrieval system
