Rhinichthys klamathensis goyatoka (western speckled dace): 130072962
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Entry
130072962 CDS
T09701
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130072962
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
130072962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_2
TPR_10
TPR_1
Motif
Other DBs
NCBI-GeneID:
130072962
NCBI-ProteinID:
XP_056094285
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDLKTAVFNAARDGKLRLLQKLLENKSDHEVLTLMAEKTSGATPLLMASRYGHLELVEFL
MERCCAPVELGGSVNFDGEIIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLDIVRYLVEHRADLEVANRHGHTCLMISCYKGHREIAQFLLERGADVNRKSV
KGNTALHDCAESGSLEIMKMLLKYGASMEKDGYGMTPLLSASVTGHTNIVDFLTTHPHTG
RAERINALELLGATFVDKKRDLLGALKYWKRAMDSRHSDSTHVLSKDKPKPVPAYDHTRE
VNSLEELEALIADPDDMRMQALLIRERILGPAHPDTSYYIRYRGAVYADSGNFERCIKLW
KYALDMQQNNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFDELMEILSKSVLE
IERAVKRPGPDPAQLGKVLSIILHLICLLEKVPCAVEQDHFKKETIYKFLKLQACGKNGF
SPLHLAVDRNTTCVGRYPVCKFPSFQVTSILLECGADVNSRDQDDNSPLHVAASNNHPDI
MNLLISCGTHFDSTNSFKQTACDLLDEKEMAKNLIQPINHTTLQCLAARAIVKHGLAYRG
NIPERLEAFVLLHR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaaacggctgttttcaacgcagcccgagacggcaaactgcgactcctccag
aagctcctggagaacaagagcgatcacgaggtgctgacgctcatggcggagaagacgagc
ggagcgacgccgctgctgatggcgagccgctacgggcacctggagctggtggagttcctg
atggagcgctgctgcgcgccggtggagctcggcggctccgtgaacttcgacggcgagatc
atcgagggcgcgccgccgctgtgggccgcctcggccgccggacacctgaaggtggtgcag
tctttactggggcacggagcctccgtcaacaacaccaccctcaccaactccaccccgctg
cgcgccgcctgcttcgacgggcacctggacatcgtgcgctacctggtggagcacagggcg
gacctggaggtggccaaccgacacggacacacgtgcctgatgatctcctgctataaaggc
catcgcgagatcgcgcagttcctgctggagagaggagccgacgtcaaccgcaagagcgtc
aaagggaacacggctctgcacgactgcgccgagtccgggagcctggagatcatgaagatg
ctcctgaagtacggcgccagcatggagaaggacgggtacgggatgactccgctgctgtcc
gccagcgtgacgggccacaccaacatcgtggacttcctcaccacacacccgcacacgggc
cgggccgagcgcatcaacgccctggagctgctgggcgccaccttcgtggacaagaagcgg
gatctgctgggagcgctgaagtactggaagagggccatggactcgcggcacagcgactcg
acccacgtgctctccaaggacaagcccaagccggtgccggcgtacgatcacaccagagaa
gtgaacagtttagaggagctggaggcgctgatcgcggacccggacgacatgcgcatgcag
gcgctgctgatccgcgagcgcatcctcggcccggcgcaccccgacacctcctactacata
cgctaccggggagccgtgtacgcagactcggggaacttcgagagatgcatcaagctgtgg
aagtacgccttagacatgcagcagaacaacctggacccgctgagcccgatgacggccagc
agcctcctctccttcgcagaactcttctccttcatgctgcaggaccgggccaagggcctg
ctgggaacctccgtgtccttcgacgagctcatggagatcctcagcaagagcgtgctggag
atcgagcgggccgtgaagaggcccggcccggacccggcccagctcggcaaggttctgtcc
atcatcctgcacctcatctgcctgctggagaaggtgccgtgtgccgtggagcaggaccac
ttcaagaaggagaccatctacaagttcctgaagctgcaggcgtgtgggaagaacgggttc
agcccgcttcacctggccgtggaccgcaacaccacctgtgtgggccgataccccgtctgc
aagttcccctccttccaggtgacgtcgatcctgctggagtgcggcgcggacgtgaactct
cgggatcaggacgacaacagcccgctccacgtggcggcgtccaacaaccaccccgacatc
atgaacctgctgatctcctgcggcacgcacttcgacagcaccaactccttcaagcagacg
gcctgcgatctgctggacgagaaggagatggccaagaacctgatccagcccatcaaccac
accaccctgcagtgtctggccgcgcgcgccatcgtcaaacacggcctggcgtaccgcgga
aacatccccgagcggctcgaggccttcgtgctgctgcacagatag
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