Rhinichthys klamathensis goyatoka (western speckled dace): 130073171
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Entry
130073171 CDS
T09701
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04517
IgSF CAM signaling
rkg04518
Integrin signaling
rkg04519
Cadherin signaling
rkg04520
Adherens junction
rkg04530
Tight junction
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130073171 (actn4)
04518 Integrin signaling
130073171 (actn4)
04519 Cadherin signaling
130073171 (actn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130073171 (actn4)
04520 Adherens junction
130073171 (actn4)
04530 Tight junction
130073171 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130073171 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130073171 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130073171 (actn4)
04147 Exosome [BR:
rkg04147
]
130073171 (actn4)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130073171 (actn4)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130073171 (actn4)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130073171 (actn4)
Exosomal proteins of colorectal cancer cells
130073171 (actn4)
Exosomal proteins of bladder cancer cells
130073171 (actn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
130073171
NCBI-ProteinID:
XP_056094592
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MVDYHAANNQTHYSYSGQQQRYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKSGT
QIENIEEDFRDGLKLMLLLEVIAGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIVGT
LRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMTEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGAWHKLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWT
DGKEAMLTQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGSLTQNRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKERESIQAIQAEVQKIAQYNGIKLAGNN
PYTSITPQSIDKKWEKVQQLVPQRDQALQEELARQQSNDHLRRQFANQANMIGPWIQNKM
EEIGRISIEMNGTLEDQLTHLRQYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTSYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGVLQAEE
FKACLISLGYDVETDKQGEAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVI
ASFKILAGDKNFITAEELRRELPPDQAEYCIARMAPYAGPDAVPGALDYMSFSTALYGES
DL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgctgctaataatcaaacacattattcgtacagcggtcaacagcag
agatacatggagcaggagaacgattgggatcgggacctactactggacccggcctgggag
aagcagcagaggaagaccttcacggcctggtgcaactctcacctgcgaaagtcgggaact
cagatcgaaaacatcgaggaggatttcagagatggactcaaactaatgctgctcctagag
gtcatcgcaggggagagattacctaaacctgaaagaggaaagatgagagtgcacaagatc
aacaatgtcaacaaagcgctggacttcatcgccagcaaaggagtcaaactggtgtccatc
ggtgcagaagaaattgtggatggaaatgccaagatgactctaggaatgatctggaccatc
atcctccgcttcgccatccaggacatctcagtggaggaaacctctgctaaagaaggactt
ctgctctggtgtcagaggaagacggctccttacaagaacgtcaacgttcagaacttccat
atcagctggaaggatggtcttgccttcaatgctctgatccatagacacaggccagagctc
attgattatgacaagctgagaaaggacgacccagtgaccaatctgaacaatgccttcgaa
gtggcagagcgatacctcgacatccccaagatgttggatgcagaggatatcgtgggcact
ctgcggccggatgagaaggctattatgacctacgtctcctgtttctatcacgccttctca
ggtgctcagaaggctgagacagcagccaatcgtatctgtaaggtattggcggtcaatcag
gagaatgagcacctgatggaggactatgaaaaactggccagcgatctgttggagtggatt
cgtaggacaatcccatggttggaaaatcgtgctccagagaaaaccatgacagaaatgcag
cagaaattggaagatttccgcgattaccgtcgggttcacaaaccacccaaagttcaggag
aagtgtcagctagagatcaacttcaacacgttgcagaccaaactccgtctgagcaaccga
ccagcctttatgccatctgagggacgcatggtgtcggatattaatggtgcatggcataaa
ctggaaggggcagagaaaggctatgaggagtggctactgaatgagatccgtcgtttggaa
agacttgaccatcttgcagaaaagttccgtcagaaagcagccatccatgagagctggaca
gatggtaaggaggccatgctaacacagaaggattatgagaccgcaacactgtctgagatc
aaagctctcctgaagaagcatgaggcattcgaaagtgaccttgctgcccaccaggacaga
gtggagcagattgccgccattgcacaagaactcaatgagctagactactacgactcccca
agcgttaatgcacgctgtcagaagatctgtgagcaatgggatgctctgggttccctcaca
cagaaccgcagagagtctctcgagagaacagagaaacagctggagtctattgatgagctc
tacctggagtacgccaagagagcagcgccattcaacaactggatggagggagccatggag
gaccttcaggacatgttcattgtacacaacatagaggagatccagggacttataactgct
catgagcagttcaaatcaactcttccagaggcaaacaaagagcgggaatctatccaggcc
atccaggctgaagttcagaaaatcgcacagtacaatggcatcaaactggctggaaacaat
ccttacacctccatcacccctcagagcattgataagaagtgggagaaggtgcagcaactg
gttccacagcgtgatcaggctcttcaggaagaactcgcacgtcagcagtctaatgaccat
ctcagacgccagtttgccaaccaggccaacatgattggaccatggatccaaaataagatg
gaggagattgggcggatatcaattgagatgaatggaacgctggaagatcagctgacccac
cttcgtcagtatgagcagagcatcatcgaatacaaacccaacatcgaccaactggaggga
gaccatcagctcattcaggaagcacttatatttgacaacaaatacacttcttacactatg
gagcaccttcgtgttggttgggagcaactccttactacaattgcccgcaccattaatgag
atcgagaaccagattctgactcgtgatgctaaaggcattagccaggaacagctgcacgag
taccgcacgtctttcaatcactttgacaaggaccacagtggtgtcttacaggcggaggag
ttcaaggcttgtttgatcagtctgggttacgacgtagaaaccgacaaacagggtgaagct
gaatttgctcgcattatgggcattgttgaccccaacaacagtggagcagtgaccttccag
gccttcatcgacttcatgtcaagggaaacaaccgacacagacaccgcagaccaggtcatc
gcctcgtttaagatcctagccggagacaagaacttcatcactgctgaggagttgaggcgt
gagcttcctcctgaccaggcggagtattgcattgcccgaatggcaccgtacgccggccct
gacgcagtgccgggtgctcttgactacatgtccttctccaccgccctgtacggggagagc
gacctctaa
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