Rhinichthys klamathensis goyatoka (western speckled dace): 130073390
Help
Entry
130073390 CDS
T09701
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130073390 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130073390 (dhx36)
03012 Translation factors [BR:
rkg03012
]
130073390 (dhx36)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130073390 (dhx36)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130073390 (dhx36)
Translation factors [BR:
rkg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130073390 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
130073390
NCBI-ProteinID:
XP_056094728
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MNRGYGNRRGRREGGRRFGDGESKWDGGAGSSGGAGYPRSSDWDSREEQGHGRGRRGGGG
GGGGGRGRGKHPPHLKGREIGLWYAKWGGIKRSEAERKSRAVVQMDESREQHITQLLNSV
QRDPGRDGHPSTSQSWRVKEEPSGHSYFDGDDPPELQNIVKVPKIEPKEQKREDELGANV
KEELNDADLEYLFQDVVRTASLDEELKKDQEKKKDNARYIDMLNFREKLPSYGMREELVK
LISANQVLVVSGETGCGKTTQVTQFILDDFIQRGMGSLCRVVCTQPRRISAISVAERVAS
ERAEPVGEGKSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDTYLSSVSHLILDEIHE
RSLQSDVLLTIVKDLLIAREDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTYPVKEFLL
EDVVELLRFQPKQQDRRPRYKRGFMHGQNARPEKEQKEAEYRESWPCYAHTLRDRYSDST
IDTLEMMDDDEKINLELIVGLIRHIVMREDDGAILVFLPGWDNISTLNDLIMADQMFKSD
QFIIIPLHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF
DTQNNIRTMTAEWVSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLE
ELCLQVKILKLGPIACFLRKTLDPPSDKAIELAITHLVDLNALDRSEELTPLGFHLARMP
VEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADHRRKMLSQNSRSDHL
TIVNAFWVSPREFIFIKKSLLMVSSQLVLACHIHS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgggtacggtaatagacgcggtcggagagaagggggtcggcggttcggagat
ggagaatccaagtgggatggaggggctggatccagtgggggtgcaggatacccgaggagc
tccgactgggactcaagggaagagcaaggacatggaaggggacgaagaggaggaggagga
ggaggaggaggaggaagaggcagaggcaaacatccaccccatttaaagggtcgagaaatt
ggactgtggtatgccaaatggggcggcattaaaagatctgaggcagagaggaaatctagg
gcagttgttcagatggatgaatcacgagagcagcacattactcagttgctgaattctgtc
caaagagatccgggcagagacggccatccctccacatctcagagctggagggtgaaggag
gagcccagtggccacagttactttgacggagatgatcctccggaactgcagaacattgtg
aaagtgccaaaaattgagcctaaagagcagaaacgggaggatgagctgggagcaaatgtg
aaagaggagcttaatgacgctgacctggaatacttattccaggatgttgtgcggacagcc
tccctggatgaggagctcaagaaagatcaggagaagaaaaaagataacgctagatacatt
gatatgctgaatttcagagagaagctaccttcttatgggatgagagaggagctggttaaa
ctgatcagtgctaaccaggtactggtagtcagtggagagacaggctgtggtaagaccacc
caggtcactcagttcatccttgatgacttcatccagaggggcatgggctctctctgcagg
gtggtttgcacgcagccacggcgtatcagtgccatatcggttgcagagagagtggcttca
gaaagggcagagccggtgggggaagggaagtcctgtgggtatcagatccgtctgcagagt
cggttaccacggaaacaaggctcggtgttgtattgtacgacgggcattattcttcagtgg
ctccgctcagatacatacctctctagcgtaagtcacctgatcttggatgaaattcatgag
aggagtcttcagtctgatgttcttctcaccatcgtgaaggacctgttaattgctcgagag
gacctaaaagtagtcctcatgagtgccacacttaacgctgagaaattcagcaagtatttc
aataattgtcccatgatccatattcctggatacacatacccagtgaaagagtttttactg
gaggatgtggtggaattgcttagattccagccaaagcaacaggaccgaagacctcgctat
aagagagggtttatgcatggccagaatgcacggccagagaaagagcagaaagaggcagaa
taccgcgaaagctggccctgttacgcccatacgctcagagatcggtactcagacagcacc
attgacacgctggagatgatggatgatgatgagaagatcaatctggagctcatcgtagga
ttgatccgacacatcgtaatgagagaggatgatggagcaattctagtgtttctgcctgga
tgggacaacatcagcaccctgaatgatttgatcatggctgaccagatgtttaagtcagat
cagtttatcatcatccccctccactctttgatgcccacagtctctcagactcaggtgttc
aaaaagccacccccgggagtgcgcaagattgtgatcgctaccaacatcgcagaaaccagt
attacgatagatgatgttgtgtatgtgatcgatggagggaagattaaggaaactcatttt
gacacccagaacaatatcaggaccatgacagcggagtgggtgagcttagccaacgccaaa
cagaggaagggccgtgctggcagagtgtctccagggaaatgttatcacctgtataatgga
ctgagggccagcctcctggataactaccagttacctgagatccaacgcactccacttgaa
gagctttgcttgcaagtaaagatactgaagttgggccccattgcgtgtttcctgcggaaa
actttggatcccccatcagacaaagcgatagagctggccatcacacacctggtggacctg
aacgccctggacaggagtgaagagctgactccattaggatttcatctagcccgtatgcct
gtagagcctcacataggaaaaatgattctgtttggggctcttcttggctgtttggatcct
gtgcttaccattgcggccagccttagctttaaagatcccttcttcataccattgggaaag
gagaagatcgcggaccacaggagaaaaatgctctcccaaaactctagaagtgatcatctc
actattgtcaatgcattttgggtaagtcctagagagtttattttcattaaaaagtcactc
ttaatggttagctcccagctggtcctggcatgccacattcacagctag
DBGET
integrated database retrieval system
