KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130073603
Entry
130073603         CDS       T09701                                 
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03440  Homologous recombination
rkg04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    130073603 (brcc3)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130073603 (brcc3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rkg01002]
    130073603 (brcc3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130073603 (brcc3)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130073603 (brcc3)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130073603 (brcc3)
Peptidases and inhibitors [BR:rkg01002]
 Metallo peptidases
  Family M67
   130073603 (brcc3)
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    130073603 (brcc3)
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    130073603 (brcc3)
   BRISC complex
    130073603 (brcc3)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     130073603 (brcc3)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     130073603 (brcc3)
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB UPF0172 REP_ORF2-G2P DUF7385
Other DBs
NCBI-GeneID: 130073603
NCBI-ProteinID: XP_056095088
LinkDB
Position
Unknown
AA seq 260 aa
MAVNAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QSIIKLQKEKEQLTQELAAL
NT seq 783 nt   +upstreamnt  +downstreamnt
atggcagtaaacgcggtacatttagagtcagacgcatttctagtatgtatgaatcatgct
ctgagtacggagaaggaggaagtaatggggctctgcattggcgaggtggacacaaaccgc
attgtgcacattcattctgtcatcattctgcgtcgatcagacaagaggaaagacagagtg
gagatttccccagagcagctttcagcagcatccactgaagcggagaggttggctgagatg
acaggacgtcccatgcgggttgtgggctggtaccactctcatccacacatcactgtgtgg
ccatcacatgttgatgttaggactcaagcaatgtatcagatgatggatcagggttttgtt
ggactcatcttctcatgctttatagaagataaaaacacaaagaccggtagagttctgtac
acctgtttccagtcagtacaggcccagaaaggctcagagtatgagcggattgagatccca
atccatgtagtcccacatgaagccattggaaaagtatgtctggagtctgccgtggaactg
cccagaatcctctgtcaggaagaacaggatacgtacagaaggattcacagtttaactcat
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggccataagcggcccgctgctgcagtggctggaagatcgactggaacagaataaa
cagagtatcatcaaactccagaaagagaaggagcaactgacacaagaactggctgcatta
taa

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