Rhinichthys klamathensis goyatoka (western speckled dace): 130073645
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Entry
130073645 CDS
T09701
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130073645 (prdm11)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130073645 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
C1_4
Motif
Other DBs
NCBI-GeneID:
130073645
NCBI-ProteinID:
XP_056095147
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MADSCAVPDHSSMEAEAECSTSASNEKSTEEPNKKPKVDHEHCTSFYFCEECKKYFLEDC
PTHGPPVFVPDTPVASGVPNRAALTVPSGIEVRRDGEKVDVCCMDENIPKGVLFGPYQGQ
IMTSDEPSGPYSWMIVDKDNKYKFIDGSDETTANWMRFIQISSEESEKNLSAFQHGNQIY
FRVCRRLTVGEKLRVWHSSEYMRRLQSVSRDSIDRNLDTGVKLEEHDEPKGPVLRSAMHG
RRTLSKHGSDEAENQPQAKKKKIDLIFKDVLEASLEANQSQNNPLNSTLSFPRARTNVCQ
VFSHPDGECKVSVFASGLASMDHHESGFDAKCIKMEDTEEDATLTGEGPSTSFCPNCVRL
KRRIRELEAELLRLRGQGHVEIKPVPPSEPLPSEDLRDSMTPIPAVLEEDDQDVDSADES
ISADLMVAADESSKLSVGSGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSR
TSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMITLFNAAYHLAL
EGRPFSDLRPLAELLKKCDLKVVDQYMNENDCQILIQHIARAFKEDLAEKIRLSPFLSII
MDGQHDDLLADTVAVYVQFTTTDGLPATEFLSLQRLCGGNVEGYLQAVDRAFGVLGLRLQ
DMLVVGLGIDGSNISSSLRANLYIAIQKTIPWLLCLPVMIHRPHLEVLDAISGKELSCLE
DLENNLKQLLSFYRYSPRMMAELRSTAPTLSEEAEFLGDIRAVRWIIGEPNVLNALIKDY
LEVVAHLKSISSQTQRGDAAAIALSLLQFLLDYQSVKLIYFLLDIIAVFSRLAFIFQGDY
LLASQVDAKIEDAIHEIGQLVDSPGEYLQEFEDNFRESFNGVDLKNLRVAESKFQSIREK
ICQRSQGILAQRFDTRSRTVVQACQVLDLASWPLNRDVLGAYGEEEILVIFDHLETLPSS
GRKLSRERIDARGSLVVEWRDLKADYCSVNGFKEVVSHIFRYKQRFPLLNHILQVVRVLP
TSTTCCDKGRGSLQKVRRNSRSRLTLDQINDLLTLAINGPPIGNFDGKRALDSWFEEKSG
NSYSLSAEVLSRMSTAEQKSVLHNMDINAEYYPDM
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcctgtgctgttccagaccactcttccatggaggcagaggccgaatgcagc
accagtgcctcaaatgagaagtcaactgaagagccaaacaaaaaaccaaaagttgaccat
gagcactgtaccagtttttatttctgtgaagagtgtaagaagtatttcttggaggactgc
cctacccatgggccgcctgtctttgtgccggacactcctgtggcgtcaggggtgcccaat
cgggcagctctcaccgtaccctcaggcatcgaggtccgccgagatggtgagaaggtggat
gtctgctgcatggatgaaaatataccaaagggggtgctgtttggtccttatcaaggccaa
ataatgacctcagatgaaccttcagggccatactcctggatgattgttgataaggacaac
aaatataaattcattgatgggagtgatgaaactacagctaactggatgaggtttattcag
atttcttcagaagagagtgaaaagaacttgagtgcatttcaacatggcaatcaaatctac
ttccgagtgtgtcggagactgacggtgggcgagaaacttcgtgtgtggcacagcagcgag
tacatgaggcgactgcagagtgtgtctcgggacagcattgaccgcaatctagacacagga
gtgaaattagaagagcacgatgagcccaaaggtccagtgttgaggtctgcaatgcacggt
agaaggaccctaagtaagcatggaagtgatgaggcagaaaaccagccccaggccaagaaa
aagaagattgacctcattttcaaagatgttctggaagcatctctggaggctaatcaaagt
cagaacaacccactgaacagcaccttgtcttttccaagagcaagaacaaatgtctgccag
gttttcagccatcctgacggtgagtgtaaagtgtcagtctttgcctctggattggcttcc
atggatcaccacgagagtggctttgatgccaaatgtattaaaatggaagacacggaagaa
gatgcgaccctgaccggcgaaggaccatcgacatctttctgcccgaactgtgtgaggcta
aaacgacgaatccgtgagctggaggctgaactgctccgtctcagaggacaggggcatgtt
gaaattaagcctgtaccaccatctgagccccttcctagtgaggacctcagagactccatg
acgccaatcccagcggtgcttgaagaggatgaccaggatgttgattctgctgatgaatcc
atttctgctgacctcatggtggctgcggatgagtcttcaaaactctcggtgggctcaggt
cgtcggattcgccgcttcaaacaggagtggctgaagaagttctggtttctccgttattca
cccacactgaatgagatgtggtgccacgtgtgcagacaatacaccgtccagtcctcccgt
acctctgcttttataattggctccaagcaattcaagatccacaccattaaactgcacagc
cagagcaatctgcacaagaagtgtttgcagctttacaaacttcgcatgcacccggagaaa
actgaggagatgtgtcgtaatatgataacactcttcaacgctgcctaccatctggctttg
gaaggacggccattttccgatctgcgacccttggcagagctcctcaagaagtgcgacctc
aaagtggtggatcagtacatgaatgaaaatgactgtcagattctcatccaacacatcgct
cgagcattcaaagaggatctggctgagaagattcgcctttcgccctttttaagcatcatc
atggatggacagcacgacgatctcctggctgacactgttgccgtttacgtccagttcacc
accactgatggtcttcctgccaccgagttcctctccctgcaaaggctttgcgggggcaac
gtggaaggctaccttcaggccgtggatcgtgcctttggtgtccttgggctaagactccag
gacatgctagttgttggcttgggaatagatggctcaaacatctcctctagtctgagggca
aatctttacatagccatacaaaagacaatcccttggttgttgtgtcttcctgtgatgatc
catcgcccccatttagaggttctggatgccatcagtggtaaggaactgtcttgcttggag
gatttggagaacaatttgaagcaactgcttagtttctaccggtattctccacgtatgatg
gctgagctaaggtcaacagccccaactctgtccgaggaagccgaatttcttggggatata
agggccgttcgttggatcataggggaacccaatgttctcaatgccctaattaaggactat
ttagaggtggttgctcacttgaagagcataagcagccaaacccagagaggtgatgctgct
gccatcgctctgtctcttctacagttcctgttggactatcagtccgtgaagctgatctat
tttctgttggacatcattgctgtcttttcacgacttgctttcatctttcagggggactat
ttgttggcgtcacaggtggacgcaaaaattgaggatgccattcatgagattggtcaactg
gtggattccccaggggagtacctacaggagtttgaagacaactttcgagagagtttcaat
ggtgtggacctcaagaacttgcgggttgcagagtccaagtttcagtccattcgagagaag
atctgtcagcgaagtcaaggcatcctggcccaacgttttgatacacgtagtcgcacagtg
gtccaggcttgtcaggtgcttgacctggcctcgtggcctcttaacagggatgttcttggc
gcatatggagaggaggagatccttgtaatttttgaccacctggagactcttccttcatcc
gggcgcaaactctctcgagaaagaatagatgccagaggaagtcttgtggttgaatggagg
gatctgaaagctgattattgtagtgtgaatggttttaaagaagtagtcagccacatcttc
agatacaagcaacgttttcctcttctcaatcacatcctgcaggttgtcagggtcttgcca
acgtcaacgacctgctgcgacaaaggaagaggttcattgcaaaaagtgcgccgaaatagc
cgttccagactgactctggatcagatcaatgatctgctcaccttggccattaacggaccg
cctatcggtaactttgatggaaagcgagcattggacagctggtttgaagagaaatctggg
aacagctattcgctctcagcagaggtgctaagcagaatgtccaccgccgaacaaaagtct
gtgttgcacaatatggatataaatgcagagtattatcctgatatgtga
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