Rhinichthys klamathensis goyatoka (western speckled dace): 130073646
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Entry
130073646 CDS
T09701
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130073646 (ambra1b)
04137 Mitophagy - animal
130073646 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130073646 (ambra1b)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130073646 (ambra1b)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
130073646 (ambra1b)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
130073646 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
130073646
NCBI-ProteinID:
XP_056095152
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MALQNRNSVLILSGRERGARMLGTQRLLQQLVEDRTRWMKWQSQKVELPDNPRSTFLLAF
SPDRNLVASTHVNHNIYITDVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTASETE
RVRLVRFDPLGHNLLTAIVNPSNQQNEDDSEGPMDSMEMALFRQRSLLRSPPVRRTPILH
NFLHILSSRSSGAQAGDQSRPAPEPREPPSTPRFQYPVRTEPSDPSASQGCTQHLGLGCL
CNRCAATRNLFTQNPTGLQPLDSPQPQTQSGPSAFSPAPSQTRTSTDRPSAFSSVFSGTA
GNSTHRGLLPLRTIDPLGSQVPGPLEAPGRLPGADWSGSLLSTGHEHGFGAIGVESSGGR
GVVPPPRTSSSSMDLLSLRRFPDGSSSSPIYTSATEGRGLVLPGMDPNRGRANDGTSSGH
HPFYDNTQRNNPASIRNVLQCNLSRYFMEYERMQELERPSGSREVAGGPGPMQELLNSSM
DTDRPGPSHNGSSHTGNGDTVAGPSQNHPNRCRSCHNLLTFNHDTQRWERSGQTSSSSQD
GPSWPLSVPPFEDPGQGARVESRAPEMRPMELSEASSGLQEQQPMGLVYNQETGQWESVY
RQPTASASSEAAQDALNPEVPVDNPDEDSLRRRLLESSLFPFSRYDMSGSRDHPIYPDPA
RLSPAAYYAQRMIQYLSRRESIRQRSLQNRLRTLSNSQAESQSNNPSSTPPEASDGDYED
IEEPGDRTRHRMPRNARMSAPSLGRFVPRRFLLPEYLPYAGLFHERGQSGLATHSSINRV
LAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNATVNVLVPHCKIYNDASCDIS
ADGQLLAVFIPSSQRGFADEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGCYVMV
GLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRMMFNVVYPMAPDQRRHVSINSARWLP
EPGMGLAYGTNKGDLVICRPVDFRSDGDSPSDLNSDSLFTVNSSSRTRGVERPGTSRSGW
RFDRDMGLMNAIGLQPRQAAPSVTSQGTQTPVVRLQNAETQTEREHPPASTFQNAYTSRH
TVQVASTSNERHTHPEMTHTLLHTPIQASVSEGSLNRTNLPPTYHADSAAEPGPGEDALS
RIRRLMAEGGMTAVVQRERSTTMASMGGFGNNIVVSHRIHRGSQTSVRTTQVGNPTAETP
AGLAIPSLFRTEPLVDSLELPGPSGSSGAPLPPQFTTRSEVVRVSPMVEPDLFADHQADV
VQHHPSPSGLNMSNRSNNNNNDHNGYSESRSRDYPDDLYGR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcagaacaggaactctgtgctgatcctgtcgggtcgagagcgaggagctcgc
atgctgggcacccagcggctcctgcagcagctggtggaagaccgaacgcgctggatgaaa
tggcagagccagaaagtagagttgccggataatccacgatcaaccttcctgctggccttc
agtccagataggaatcttgtggcctcaacccacgtcaaccacaacatctacatcacagat
gtgaaaacaggaaagtgcctgcactctttagtgggccatcgacgcacaccttggtgtgtg
acctttcaccccaccatccctggcctggttgcctctgggtgccttgatggagaagtccgc
atttgggacctgcatggtggtagtgagagctggttcacagagagtaatgttgccatcgct
tctctagcgttccaccccacagctcagctcctcctcatcgccactaacaacgaacttcac
ttttgggactggagccgaccagaaccttttgctgtggtcaagaccgccagcgagacagaa
cgtgtccggttggtgagatttgatcctctaggtcataatctcttgacagcaattgtgaac
ccatccaaccagcagaatgaagatgactccgaaggtcccatggacagtatggagatggct
ttgttccgccaacggtctcttttacgctccccacctgtacgccgcacgcccatcctgcac
aatttcctgcacatcttgtcctctcgctcttctggggcacaggccggcgatcagtcccgt
cccgccccggagccccgtgagcctcccagcacacctcggttccagtacccggtgcggacg
gaaccgagtgacccctcggcctcacagggctgcactcagcatttgggcttgggctgcctt
tgcaatcgctgcgccgccacgcggaacttattcacacagaatccgacaggcctccagcct
ttggattcgcctcaaccgcagactcagtcgggcccctccgccttctcgcccgcccccagc
cagacccgcacctccacggatcgaccttctgcttttagcagtgtgttcagcgggactgcg
gggaactctacacatcggggtctcttgcctcttaggactattgatcccttggggtcacag
gtgcccgggcctctcgaggcccccgggcgtctccctggggctgattggtctggtagtctg
ctgagcacgggacatgaacatgggttcggtgcgattggggtagaaagcagcggcggaagg
ggtgtggtgccccctcctaggacgagctcctcttcaatggatctcctctccctgcgcagg
ttccccgatggttcctcttcatcacccatatacacgtctgctacagaagggcggggccta
gtgctgcccggcatggatcccaaccggggacgagccaacgatggcacaagtagtggccat
caccctttctacgacaacacccaacgcaacaatcccgcctccatacgcaacgtcctgcag
tgcaacctgagccgttacttcatggaatatgagcgcatgcaggagttagagcgacccagt
ggcagccgagaggtggcaggtggaccaggacccatgcaggagctgctcaacagtagcatg
gacacagatcgacccgggccttcgcataacggctcatcccacactggaaatggagacacg
gttgcagggccctcgcaaaaccaccccaatcgctgccgttcgtgccacaatctcctcacc
ttcaaccacgacacccagagatgggaacgttctggtcagacctcttcttcttctcaagac
ggaccatcctggccgctttcagttcctccgtttgaggacccgggtcagggtgcacgagtg
gaatcccgagcccctgagatgaggcctatggagttgagcgaggcctcctctgggctacag
gagcagcagcccatgggtctggtgtacaatcaggagacagggcagtgggaaagcgtgtac
cggcaaccaacggccagcgcttcttctgaggcagcgcaagacgccttaaacccagaggtg
cctgttgataatccagacgaggactcacttaggaggaggttgttggaatcgtcgctgttt
ccattctctcgttatgatatgtctggctccagagatcatcctatttacccagatcctgcc
aggctgtctccagctgcttactatgctcaaaggatgatccaatatctgtctcggagagaa
agcatacgccagcgttcactgcagaatcgcctacggacactctcaaactctcaagctgaa
agccagtccaacaacccatcctccacgccaccggaagccagtgatggagactacgaggac
atcgaggagcctggagacagaacaagacatagaatgccccgcaatgctcgaatgtcggcc
ccctcgctcgggcgctttgttccaaggaggttcctgttaccggagtacttgccttatgct
ggactcttccatgaaaggggtcagtcaggcctggccactcactcctctatcaacagagta
ttagcaggagcatctataggtgacggccagtcagctgtggccagtaacattgccaacacc
acttataggctgcagtggtgggatttcaccaagtttgaccttccggagatcagcaatgcc
actgtgaatgtgttggttcctcactgtaagatctacaacgatgccagctgtgatatttca
gccgacgggcagctgctggccgtgttcattcccagcagccagcggggttttgcagatgag
ggaatcctggccgtctactcccttgctccacataatcttggagaaatgctgtacaccaag
agattcggtccaaatgcaatctcagtgagtctttcacccatgggctgctacgtgatggta
ggactggcctccagacggatcctgctccatcccaccactgaccacatggtggcgcaagtg
ttccgtctccagcagccacacggaggagagacctccattagaatgatgtttaatgtggtg
taccccatggctccggaccaaaggagacacgtcagtattaactcagcccggtggcttccg
gagccaggcatgggattggcctacggaaccaataagggcgatctggtcatctgcaggcca
gttgatttccgcagtgatggagacagtccgtcggatctgaactcggattcgttgtttact
gtcaacagcagcagccgaacccgtggagtggagcgcccagggacgagcaggtccggctgg
cgttttgaccgtgacatgggcctcatgaacgctattggcctgcagccgcgccaggccgcg
ccttctgtgacctcacaggggacacagacaccagtggtgcgactgcagaatgccgagacc
cagacggagagagaacatcctccagccagtaccttccagaacgcatacacatccagacac
acggttcaggtggccagcaccagcaatgagagacacacacacccagagatgacacacaca
ctgttacacacaccgattcaggcatcggtttcagaggggtcgctgaaccggacaaacttg
ccccccacatatcacgcggactcagcagccgagccgggtccgggagaagacgcgctgtct
cgcatccgccgcctaatggctgaaggaggaatgacggccgtggtccagcgggaacgcagc
actactatggcctcgatgggtggcttcggaaacaacatcgtggtcagccatcggattcac
cgtggctcgcagacctcggtcaggacgactcaggtgggaaacccaaccgcggaaacgcct
gctggactagctatcccatctctttttcgcactgaacccttggtagactctctagaactt
cctgggccatcagggtccagcggcgccccgcttccgccacagtttacaactcgctctgag
gtcgtgagggtgtctcctatggttgagccagacttgtttgccgatcatcaagccgatgtc
gtgcaacaccacccatccccgagcggtttgaatatgtctaaccgtagcaacaacaataac
aatgaccataacggctacagtgaaagccggagccgagattatcctgacgacctatatggc
agatag
DBGET
integrated database retrieval system
