Rhinichthys klamathensis goyatoka (western speckled dace): 130073649
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Entry
130073649 CDS
T09701
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130073649 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130073649 (lrrc4ca)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
NGL family
130073649 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
130073649
NCBI-ProteinID:
XP_056095156
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQENLIQVIRVDSFKHLRHLEILQLSKNHIRTIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLTYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHVERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTESSHDEGHPTVQQKGAPT
PSSGIWETLPPSFTTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMESHLTLPP
LEHEHLNHYTAYKTVYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgttcgtgctgtcactggccctgcagcttctggtggtggct
ggcctggtgcgagcgcagacctgcccctccgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacacgacgttcccttcgagatgtacctgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgattagggttgacagcttcaagcatttg
aggcacctggagatcctgcagctcagcaaaaaccatatccgcaccattgaaattggagct
ttcaacgggctggccaacctcaacactctggagctcttcgataatcgtttaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaggagctttggttgaggaataaccct
attgagagtataccctcttatgccttcaaccgtgtaccatcgctgcgaaggctagacttg
ggtgagctgaaaagactcacttatatttcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttgaaggagatccccaaccttattcctcttgtt
cgtttggatgagttggagatgtcaggaaaccagctctctattattaggccagggtctttc
aaaggccttgtccacttacagaaactgtggatgatgcatgcacagatccagactatcgag
agaaatgcctttgatgatcttcagtcccttgtggagctcaatttggcccacaataacctt
accctcctgcctcatgacctcttcaccccactacaccacgtggagagggtacatttgcac
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtgccggccaataccagttgctgtgcccgctgtgcgtcacctaccagccacaaagggcgc
tacatcggcgaactcgaccagaactatttccattgttatgcaccggtgatcgtggagccc
ccggcggacctgaacgtgactgagggaatggcagcagaactgaaatgtcgagcgaattct
ttgacctcagtcagctggatcacgcccaatgggtccatcatgacgcacggggcatacaag
atacgcatttccgtgctcaacgatgggacgttaaactttaccaatgtcacgatgcaggac
actggaacgtacacttgtatggtgagcaactccgcaggcaacacaacagcctccgctact
cttaatgtgtcttcgacagagaacagcagcttcagttacttcactacagttaccgtcgag
accacagaatcgtcacatgatgagggccacccaacagtacagcagaaaggcgccccaact
ccttcttctggaatttgggagactttaccaccttctttcactactaccaccaccaccaca
gcacggacgccactgtccaccaaggccaccgataagacctacaccatccctgtcacggcc
ctgatcgacggctccctcaacaccttggatgaggtcatgaagaccacgaagatcatcatt
ggttgctttgtggccatcacgctgatggcggccgtcatgctgatcatcttttataaaatg
cgcaaacagcatcaccagcaaaaccaccacgcaccgacacgaaccattgagattatcaat
gtagatgaggattgcgtgacgggtggacctaccatggagagccacctcacccttccccca
ctggagcatgagcacctgaatcattacactgcttacaagactgtgtacaatcacgcctcc
accatcaattctatacacagctccgcccacgaacctttgctaattcgggccagctcaaaa
gacaatgtacaagaaacccagatctga
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