Rhinichthys klamathensis goyatoka (western speckled dace): 130073658
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Entry
130073658 CDS
T09701
Symbol
myo5ab
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130073658 (myo5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130073658 (myo5ab)
04131 Membrane trafficking [BR:
rkg04131
]
130073658 (myo5ab)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130073658 (myo5ab)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130073658 (myo5ab)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130073658 (myo5ab)
mRNA cycle factors
P-body specific factors
130073658 (myo5ab)
Membrane trafficking [BR:
rkg04131
]
Others
Actin-binding proteins
Myosins
130073658 (myo5ab)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130073658 (myo5ab)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130073658 (myo5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_16
NPHP3_N
AAA_22
Zeta_toxin
TSC21
Motif
Other DBs
NCBI-GeneID:
130073658
NCBI-ProteinID:
XP_056095174
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MAAPELYSKFARVWIPDTTEVWRSAELTRDYRPGDTVLHLRLEDETECEYKLDPKSGVLP
HLRNPDILVGENDLTALSYLHEPAVLLNLRVRFTDSKLIYTYCGIILVAINPYESLPIYG
SDIINAYSGQNMGDMDPHIFAVSEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSDESSVEKKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRKHNIIGGNMR
TYLLEKSRVVFQASEERNYHIFYQLCACAHLPEFEPLKLGSADDFPYTNQGRSPVIEGVN
DLKEMQATRKAFSLLGITEAHQMGLFQILSAILHLGNVEVKERGSSSCGISDENGHLAVF
CDLTEVSYESMAHWLCHKKLKTATETLNKPVTRLEAVNGRDALSKHIYAKLFSWIVGQVN
KSLSTSSKPHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGLLDLLDEECTMPKGSDESWAQKLYNTHLKKSSHFEK
PRMSNTAFIILHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFALLVELFQDEETPAA
QSTTATSGRAKIGRSTQSFREHKKSVGLQFRNSLHLLMDTLNATTPHYVRCIKPNDLKAP
FIMDPHRAVQQLRACGVLETIRISAKGFPSRWTYQEFFNRYRVLMRKKDILSDWKLTCQN
VLERLVQNKDKYQFGKTKIFFRAGQVAYLEKLRADKLRTACIHIQKTIRCWLARKKYLRI
RQATITLQRYTRGHQARCLCNNLRRTRAGVIFQKNTRMWAARRQYLRQRTAAVLIQRLLR
GYTARLEYKRLVFEHKALLIQRWVRGFLARWRYRRIKRAVVYLQCCVRRMLARRELKKLK
IEARSVEHFKKLNVGMENKIMQLQRKLDEQHKENRELSERMSGLESHSAADIEKLHIQLK
SLQEVEEEARHRGDLVTSLQEELELVRQELEKNKEMVADLNEKNTLLKSEKDEMNRVIQE
QEQQIREIPESTQQESTEHVQAQLNEERFRYQNLLTEHLKLEERYADLRSEKEAALDLSK
LGHYRADSGYSSSQSESIHSSVLTGSEVSSLEREDAVQTAADVSLLMKLQRRVTELEKEN
MDLQSDMDTKEEQLQLERTKELEDCQRVLGAERDYEALKRQELESDNKKLKKDLQDLRQS
LSKGKGSKVASPGGQAYNVVLEQLNSTNEELEVRKEEVLILRSQLVNQEAFKHKETGGEG
DSGDSSRSPTLDLHELNEDGELWMAYESLKETNRILASQLQTQGQSHEKEVEGLRAELQR
LKAELGQQQQMMSESLELPHDARVQASLQHEISRLTQQNMDLLEQTGKQDKMVRKLKKCL
KIYMKKFGEPEGVHFEQSSPENVVGESGRTVSIVRKERDFQGMLEYRKEDENKLFKTLIT
ELKPRGVAVNLIPGLPAYILFMCLRHADYANDDQRVSTLLNSSINAIKSVLKKREEFETI
SFWLANTCRFLHCLKQYSGEEGYTKHNTPRQNEHCLSNFDLSEYCQVLSDLAIQIYQQLI
RVIENIIHPMIAPAMLEQETIQGVMGVKPTGMRKRTSSFPEDSCHSLESILKQLDVFYYT
LLQHGNDTELVRQVIKQQFYLICCVTLNNLLLRKDMCSWSKGLQIRYNVCQLEEWLLDKD
LQGSGARESLEPLIQAAQLLQIKKKSQDDADAICTMCTALTTQQIVKILSLYTPVNEFEE
RVSISFIKSVQNLLKDRKESSQLLMDAKIIFSVTFPFNPSSVALETIQLPSSLNLSFLTR
V
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggagctttactcgaagtttgctcgagtctggatcccagacaccacagag
gtgtggagatcagcagagctgaccagagactacaggcccggagacaccgtcctacatctg
cggctcgaggatgagacggagtgcgagtacaagctggacccgaagagtggcgttctgcct
catcttcgtaacccggacatcctggtgggcgagaacgacctcacggctctcagttacctc
catgaaccggccgtgctgctcaacctgcgggtccgattcacagactccaagcttatctac
acctactgcgggatcatcctggttgccatcaatccatatgaaagtcttccgatctatgga
tcagacatcatcaatgcttacagtgggcagaacatgggtgatatggaccctcacatcttc
gctgtatcagaagaggcctataaacagatggccagagacgagaagaatcagtccatcatc
gtgagtggagaatctggtgcagggaagaccgtgtctgccaaatatgccatgcgttacttt
gctacagtcagtggatcctctgacgagtccagcgtggagaaaaaagtgctggcgtccagt
cctatcatggaggctataggaaatgccaagacgacgagaaacgacaacagcagtcgcttt
gggaagtacattgagattggatttgacaggaagcacaacatcataggaggcaacatgagg
acgtaccttctggaaaagtctagagtggtgttccaggcgagtgaggagagaaactatcac
atcttctatcagctctgtgcctgcgcccatttacctgagtttgaacctctaaagttaggt
agcgctgatgactttccctacactaaccaaggcagaagtcccgtcatcgagggagtgaat
gacctgaaggagatgcaggccacaaggaaagccttttcactgctgggaattactgaggca
caccaaatgggtctgttccaaatcctgtcagccattcttcatctgggaaatgtagaagtg
aaggagagaggatcttctagctgcggcatctctgatgaaaacggccacctggcagtgttt
tgtgacctcactgaggtttcgtatgagtccatggctcactggttgtgccataaaaaactc
aagaccgccacagaaaccctaaacaagcctgttacccgtttggaggccgtcaacggccgt
gacgctctctcgaaacacatttacgccaagctcttctcctggatcgtcggccaggtcaac
aaatccctgagcacttcctccaaaccgcactcgttcatcggtgtcctagacatctatggg
tttgagacgttcgaggtgaacagcttcgagcagttctgcatcaattacgccaatgagaag
ctccagcagcagtttaacatgcacgtgttcaaactggagcaggaggagtacatgaaggag
cagataccatggacgctcatcgatttctacgacaaccagccctgcatcaacctgatcgag
gccaagatgggcttgctggaccttctagacgaagaatgcactatgccaaaaggttcagat
gaatcgtgggcgcaaaagctgtacaacactcacctaaagaaaagctctcactttgagaag
ccgcgcatgtctaacacagctttcatcatactgcactttgcagacaaggttgaataccag
tgtgatggatttctggagaaaaataaagacacagtcaatgaagaacaaattaatgtgctg
aaggctagcaagttcgccttgctggtcgagctcttccaggatgaggaaacacctgcggct
cagagcaccacagcaacatctggtcgagcaaagatcggacgctccactcagtcttttagg
gagcacaagaaatcggttggactgcagttccggaactctctgcacctgctcatggacacg
ctgaacgccaccaccccacactacgtgcgctgcatcaagccaaatgaccttaaagccccc
ttcataatggaccctcatcgagccgttcagcagctcagagcgtgtggggtcctcgagacc
attcgtatctcagccaaaggcttcccttccaggtggacttatcaagagttcttcaatcgc
tatcgtgttctaatgaggaagaaagatatcctctcagactggaagttgacctgccagaat
gtcctggaacggcttgtgcagaacaaagataaataccagttcggaaaaacaaagattttc
ttccgggccggacaagtggcttacctggaaaagctcagggcggacaaactccgtacggct
tgcatccacatccaaaaaaccatccgctgctggctggcccgcaagaaatacctgcgtatt
cgccaggccaccattaccttgcagagatacacgagaggacaccaggctcgatgcctgtgc
aataacctgagaaggacacgggccggagtgatctttcagaaaaacacacgcatgtgggcg
gcgagacgacagtatctgcgacagagaacagcagcggttctcattcagaggttactgcgc
ggatacacagccagactggagtacaaacggctggtgtttgagcacaaggctttactgatc
cagcgctgggtgcgtggcttcctggcccgctggcgttaccgtcgcatcaagcgtgccgtg
gtgtatctgcagtgttgcgtgcgcaggatgctggcccgtcgagagctcaagaagctcaag
attgaggccagatctgtcgagcacttcaagaagctcaatgtcggcatggagaacaagatc
atgcagctgcagaggaaactggatgagcagcataaggagaaccgagagctttctgagcga
atgagtggactagagagccacagtgctgctgatatagagaagttgcacatacagctcaag
tctcttcaggaggtggaagaggaggcccgtcaccgtggagacctggtgacatcgttacag
gaggagctagaattggtccgtcaggagctggagaagaacaaagagatggttgctgatctc
aatgagaagaacacactgctgaagagtgagaaagatgagatgaacagagtgatccaggag
caagagcagcagataagagaaattcccgagtcgacccaacaggagtccactgagcacgtg
caagcccagctgaacgaggagcgattccgttaccagaaccttctgaccgaacacctgaaa
ctggaggagcgctacgctgatctgagatcagaaaaagaggcggctttggatctctctaaa
ctgggtcattacagagccgactctggctacagcagcagccaatcagagagcatccacagc
tctgtgctcacagggtcagaggtcagctctctagaaagagaggacgctgtgcagacggca
gctgatgtgtctctcctgatgaagctgcagaggagagtcactgaactggagaaggagaac
atggacctgcagagtgacatggacaccaaagaagagcagctacaactggagcgaactaaa
gaactggaagattgtcagagagtattaggggctgagagagactatgaggctctgaagcgt
caggagctagagtctgacaataagaagcttaagaaggatctgcaggatctccgtcagtct
ctcagtaaggggaaggggtcaaaggtggcgtcccctggaggtcaggcatataacgtggtc
ctcgagcagctcaactccaccaatgaagagctggaggtgcgaaaggaggaggtgcttatt
ctgcgatctcagctggtcaatcaggaggcatttaaacataaggaaacaggaggtgaagga
gattcaggggactcaagcagatccccgactttggaccttcatgagctgaatgaggatgga
gagctctggatggcttatgagagcctgaaggaaactaacaggattctggcatctcagttg
cagacacagggacagtcccatgagaaggaggtggagggtttgagggcggagcttcagcgg
ttaaaggcggagcttggccagcagcagcagatgatgtcagaaagcttggagcttccgcac
gacgctcgagtacaagcaagcctgcagcacgagatcagtcgcctcacgcaacaaaacatg
gacctcttggaacagacgggaaaacaggacaaaatggtccgcaaactaaagaaatgcctg
aaaatatatatgaaaaagtttggggagcctgagggtgttcatttcgagcagtcctctcca
gagaacgtggtcggagagagcggtcgcacggtcagtatcgttcgaaaagagagggatttc
caaggcatgctggagtacaggaaagaagacgagaacaaactgttcaagacactcatcaca
gagctcaaaccccgaggtgtcgctgtgaatctgatcccaggcctgcctgcttacattctc
ttcatgtgtctgcgacacgccgactacgccaacgatgaccagcgggtctccaccctcctg
aactcctccatcaacgccatcaagagcgtactgaagaaacgggaagaatttgagacaatt
tcattctggttggcaaacacctgtcgcttcttacattgtctgaagcagtacagcggagaa
gagggctacacaaagcacaacacccctcgacaaaacgagcactgtctgtcaaactttgac
ctgtctgagtattgccaggttctgagcgatctagccatccagatctaccagcagctcatc
agggtcatagaaaacattattcaccccatgattgcaccagccatgttggagcaggagacc
attcagggagtgatgggtgtgaagcccacaggaatgaggaagcgcacgtccagtttccca
gaggacagctgtcactcgctggagtccattttgaaacagctggatgttttctattacacc
ctgctccagcatggcaacgacaccgagctggtccgacaggtcatcaaacagcagttctac
ctcatctgctgcgtcacactaaacaacttgctgctacgcaaggacatgtgctcctggagt
aaaggcctgcagatcaggtataatgtgtgtcagctggaggagtggctgctggataaagat
cttcagggcagtggagctcgtgagtctctggagcctctgattcaggcggctcagcttctg
cagatcaagaagaagagccaggacgacgcagacgccatctgcaccatgtgcacggctctc
accacccaacagattgtgaaaatcctcagcttgtacacaccagtgaatgagtttgaggag
agagtgtctatatcattcataaagtctgtacagaatttattaaaggatcgtaaggagtct
tctcagttactgatggacgctaagatcattttctcagtcactttccccttcaacccttca
tctgtggccctcgagaccatccagctccccagcagcctcaatctgagcttcctgacgcga
gtgtaa
DBGET
integrated database retrieval system
