Rhinichthys klamathensis goyatoka (western speckled dace): 130073664
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Entry
130073664 CDS
T09701
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130073664 (lingo1a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130073664 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
130073664
NCBI-ProteinID:
XP_056095182
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNAQERSVLCHRKKLMSVPE
GIPSETRLLDLSKNRIKTINPDEFSAFPHLEELELNENTISAIEPGAFNNLYGLQSLGLR
SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRL
HDLLRLQEFHLVGGRLTMIEPYSFRGLNYLKILNVSSNALTTLEEAVFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGTTIHFVCQADGDPTPVIMWLSPQKQFITMKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTLAFISNQPNDNGANGTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRKSDAGMS
SSGNADAPRKFNMKMI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattcta
atcttgatgctgggcacagtgctgtctggctctgccacgggctgcccatcacgctgcgag
tgcaatgctcaggagcgctcggtcttatgccaccgcaagaaactgatgtccgttccagag
gggatcccgtcggaaacacgactcctggacctcagcaagaatcgaatcaaaaccatcaac
ccagatgagttctctgcctttccgcacttggaagagctggagctcaatgaaaacaccatc
tcggccattgagcccggcgcctttaacaacctgtatggcctgcagagtctgggactgcgc
agtaacaagctgaagctcattcagttgggagtgttcacaggcctcagtaacctaacaaag
ctggacatcagtgaaaataagatcgtaattctgctggactacatgttccaggacctctac
aacctgcgctctctggaggttggggataatgaccttgtcttcatatcccaccgggcgttt
catggtctcagcagcttggagcagcttacgctagaaaagtgcaacctgacctctgtcccg
acagaggccttcacacatctgcacagcttggttacactgcgcttgcgaaacctcaacatc
aacagcatcagagattacagcttcaagcggctctaccgtctcaaagtcctggaaattgcc
aactggccctacttggataccatgaccaccaactgcttgtacggattgaatcttacctcc
ctaacgatcactaatgcaaacttgacgtcgattccatatttggctttgcgacacctggtt
tatcttcgtttcctcaacatgtcctacaatcccatccagatgatcgagggcaaccggctc
catgacctgctcagactgcaggagttccacctggtgggcggtcgactgacaatgatcgag
ccctactccttcagaggacttaactacctgaaaatcctcaatgtctccagcaatgccctt
accaccctggaggaggctgtgtttcattcagtggggaacctagagaccctcgcattgtat
gacaatccgctggcttgtgactgccgtttgctttgggttttccgacgccgctggaggctc
aacttcaaccgccagcaaccgacttgctcctcacccgagttcgttcaaggaaaagagttc
aaggactttcctgacgtgcttcagcccaattacttcacgtgtcgcaagtctaggatccga
gaccggaagccacagcaaaagtttgttgacgaaggcaccaccatccacttcgtgtgtcaa
gcagacggagacccaacgcccgtcatcatgtggctttccccacaaaaacagttcatcacc
atgaaaacgataggacggctcactgttttcccagatggcaccctggaggtgcgctacgca
cagattcaggacaatgggacgtatgtgtgcattgctagcaacgccggtggaaacgacaca
gctttggcccacctgcacgtccacagttactcgccagactggcccaaccaaccgaacaaa
accttggcgtttatctctaaccaacccaacgacaacggagccaatggaacaagagcaact
gtcccgttcccgtttgatataaagactctaatcatcgccaccactatgggcttcatctcc
ttcttgggtgtggttctgttctgcctggttctgctctttctttggagcagaggcaaagga
aacagcaaacacaacattgagatagagtacgtcccgcgcaaatcggacgctggaatgagc
agcagcggcaacgccgatgcccctcgaaaatttaacatgaaaatgatataa
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