Rhinichthys klamathensis goyatoka (western speckled dace): 130073734
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Entry
130073734 CDS
T09701
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130073734
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Other domain-containing proteins
Patched domain-containing proteins
130073734
BRITE hierarchy
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
OST_P1
Motif
Other DBs
NCBI-GeneID:
130073734
NCBI-ProteinID:
XP_056095284
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAKCKTDCMERPLSLAFEKLGRVVGRHPCVFLLLALYVATALGAGFIFLQEREANDIEDQ
FTPVNGPAKLERAIVVENFPQSEEFSQLRLSSEGTYASLIITGLQRENILSEAAFNDIIE
LDRQVKSMTTGNAFENLCAKTKGRCMSNAILDIISYNATKIVSSNITYPMNNDMFLGITI
GGVELNPDSSELTSAKAVRLLYFLDEKKTRENLHWLDGFLKLLSNSTEQKTVHVSYFTSI
SRQNELETNSDSIIPLFSVTYVLAITISILSCLRLDCVRTKVWVAAFGVVSAGMAVLASF
GLLLFCGMPFAMTVETAPFLILGVGVDDMFIMISCWQKTEVHKAVELRLAETYKEAGVSI
TITTLTDVLAFYIGLMTPFRSVQSFCMYTSTALLFCYIFNITFFGACLALNGRREKGNRH
WLTCMKVPEATGDGGGCCVGGAYDKNTHKEFEMPMDSFFKNYYGPFLTRVWVKALVCLVY
AGYLAVSIYGCFQMQEGLDVKNLAADGSYVGSYYDKEDEFFSAFGPNVMLVIKNEDFQYW
NPTARKSLDLCLEKFQNLTVADSGISTFSWLSEYMQYGQNAGFNLDNETQFKSHLTAFLT
QSVFGQDINFTNNQIHASRMFIQTVNIRTAIDEKNMLNAFRETAEKCGKLQTPVDLIVYH
PAFVYFDQFAVIVSNTIQNIVVATCAMLVISLLLIPNPLCSLWVTFAIASVIVGVAGFMA
LWDVSLDAVSMIILVICIGFSVDFSAHISYAFVSSEKSSANEKAMDAINKLGYPIIQGAV
STIAGVVVLAAAKSYIFRTFFKIMFLVILFGAVHGIIFIPVFLTFLGTCSKNKKNLPELS
DTSERRVIAVVIQNVWCANPDCP
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtgtaaaacagactgcatggaaaggcctctgtctctggcctttgaaaaactc
ggtcgtgtggttggtagacatccatgtgtgtttcttttattagctttatatgtggcgact
gcccttggagctggttttatctttcttcaggagagggaagcaaatgatattgaagaccag
tttacgcctgtcaacggacctgccaagttggagagggcgattgtggtggaaaatttccca
caatcagaagagttttctcagctacggctttcgtctgaaggcacttatgcctctttgata
atcacaggcttgcaaagagaaaatatattatctgaagcagcttttaatgacattatagag
ttagacagacaagttaaaagtatgacgacaggaaacgcttttgaaaacctctgtgccaaa
acaaagggaaggtgcatgtcaaatgcaattttagacattataagttacaatgctactaaa
atagtttcttcaaacataacatacccgatgaataatgacatgtttttgggaataaccatt
ggcggtgtagagctaaatccagatagctcagagctgaccagtgcaaaagcagtcaggctt
ttatattttttagacgagaagaagacaagggaaaaccttcactggcttgatggctttcta
aaactcctctcaaactctacggaacagaaaacggtccatgtgtcttactttacatcaata
tcaagacagaatgagttggagaccaattcagactctatcatccccctcttctctgttaca
tatgtgctggctattaccatttcaattctgtcttgtttaaggttggactgtgtcaggacg
aaggtgtgggtggctgcgttcggtgtggtctccgctgggatggccgtgttggccagcttt
gggctgctgctgttctgtgggatgccgtttgccatgaccgtggaaacagcgccctttctg
attctgggtgttggtgtagatgacatgttcattatgatctcctgctggcagaagactgaa
gttcataaagccgttgagcttcgtttagcagaaacgtataaagaggccggtgtgtccatc
actattaccacgctgacagatgtgctggctttctacatcggcctcatgacgcctttccgc
tcagttcagtccttctgcatgtacaccagcacagctcttctgttctgctacatcttcaac
atcaccttctttggcgcgtgtctcgcactgaatggtaggagagagaaaggcaacagacac
tggctgacctgcatgaaagtcccagaagccactggtgatggtggaggctgttgtgttggt
ggggcgtatgataaaaacacacataaggaatttgaaatgccaatggattcattctttaaa
aactattacggccctttcttaacaagagtgtgggttaaggcgctcgtgtgtctcgtctat
gccgggtatttggcagtcagtatctatggatgcttccaaatgcaggaaggtttagatgtg
aaaaatttagcagcagacggttcgtatgttggtagttactatgacaaagaagatgagttc
ttctctgcctttggtcccaatgtcatgttagttataaagaatgaagactttcagtactgg
aacccaactgctcgcaaaagtcttgacttgtgtttggaaaaatttcaaaatctgacagtg
gcagattcaggcatttcgactttttcttggctgagtgaatacatgcagtatggacagaat
gcaggtttcaatttagacaatgaaacacaattcaaaagccatttaactgcatttcttact
cagtcagtttttggtcaagatattaatttcacaaacaatcaaattcatgcatcacgtatg
ttcattcagactgtgaacatccgcacagcgatcgatgagaagaacatgctgaatgcattt
agagaaaccgccgaaaaatgtgggaaattgcagacaccagttgatctgatagtgtaccac
cctgcatttgtctattttgaccaatttgccgtcatcgtcagcaatacaatccagaatata
gtagttgctacatgtgcaatgttagtcatttcactcctgttgatcccaaaccctctttgc
tctctctgggtgacatttgccatcgcatctgtcattgtgggagtggccggtttcatggca
ttatgggatgttagtttagacgctgtgtctatgattattcttgttatttgtatcgggttt
tctgtcgacttctctgctcacatatcctatgcttttgtgtcaagtgaaaagtcctcagcg
aatgagaaagccatggatgccatcaataaactaggctatcccatcattcagggtgccgtg
tccactatcgcaggtgtggtggtgctcgctgctgccaaaagctacatcttcaggaccttc
ttcaaaatcatgttcttagtcattctgtttggggccgtccatggcatcatattcataccg
gtgttcctgaccttcctcggcacttgtagtaaaaacaaaaaaaatcttccagagctcagt
gacacaagcgaacggcgagtaatagcagttgtgattcagaatgtatggtgtgcgaatcct
gactgtccatag
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