Rhinichthys klamathensis goyatoka (western speckled dace): 130073805
Help
Entry
130073805 CDS
T09701
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130073805 (smc1a)
04114 Oocyte meiosis
130073805 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130073805 (smc1a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130073805 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
130073805 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
130073805
NCBI-ProteinID:
XP_056095399
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYCEDNGDECTFTRVIIGSSSEYRINNKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNEEEIEKLNR
ELSQRNREIEKDRKKMDHVEEELKEKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELDCEQGAVEMARQEFDERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYISTSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDITELRDRMNLVEDEVFVEF
CEEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVMMWEQ
TVKKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQGEGSSQVE
DSISSPKASSSVHAKEALIEIDYSNLNEDLKDSLSEEEIKAEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKSLSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPND
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttaaagctgatcgagatcgaaaatttcaaatcttacaaaggacgccaaata
atcggaccgtttcacaaatttacagcaataattggaccaaatggatctgggaagtcaaac
ctgatggacgccatcagttttgtattagcagagaagaccagtaacctgcgcgttaaaaca
ctgaaggatctcatccatggagcaccagtaggaaaaccagcagccaaccgtgccttcgtg
agcatggtctactgcgaggacaatggagatgaatgcactttcacacgggtcatcattggt
tcctcctcagagtaccgaatcaacaataaggtggtcgggctttcagactacagcgaggaa
ctggagaaactgggtatccttattaaggccagaaattttcttgtgtttcagggtgcagtg
gagtcgatagccatgaagaatcctaaagagaggacggctttgtttgaggagatctcccgc
tctggtgagctggcccaggaatatgaccgcagaaagaaagagatggtgaaagcagaagaa
gacacacagttcaactatcaccgtaagaagaacatcgcagcagagcgcaaagaggccaaa
caggaaaaagaggaggctgagaggtaccagagactgaaggatgaggtggtcagggctcac
gttcagttacagctctttaaactctaccataatgaggaggagatcgagaagctgaacaga
gagttgtcccagcgcaaccgtgagattgagaaggacaggaagaagatggaccatgtcgag
gaagagctcaaggaaaagaagaaagagctgggaagaatgatgcgagatcagcagaatgtg
gagaaggagataaaagagaaagatgctgagctgaatcagaaacggccacagtatatcaaa
gccaaggagaacaccgcccataaaattaagaagcttgaggtggctcgaaagtctttgcag
aacgcccagaagatgtacaagaagcgtaaggcagacatagaggaactggactgtgagcag
ggtgctgtggagatggcaaggcaggagtttgatgaacggatggaagaggaagcgcagagt
caaggccaagatctgacacttgaggagaaccaggtgaagcagtatcataggctgaaggag
gaggccagtaagcgggcagctaccttggcacaggagctagagaagttcaacagggaccaa
aaggccgaccaggacagactggatctagaggagaggaagaaaattgagacagaggccaaa
ataaagcagaagattcgagagatcgaggaaaaccagaagcgcattgaaaagctggaggac
tatatttcaactagcaggcagtctctggatgaacagaggcgtatggaagaggaactgact
gaggaagtggagctggccaaaagaaggattgatgagataaacatggagttaaaccaagtg
atggagcaacttggagatgctcgtattgacaggcaagagaacagccgtcagcagcgcaaa
gctgaaattatggagagcattaaacggctttaccccggctcagtgtatggcagactgatc
gacttatgccagcccacccagaagaaataccagattgcagtgaccaaagtcctgggaaaa
aacatggacgccatcattgtggactctgagaaaaccggcagagattgcatccagtacatt
aaagagcaaagaggagaaccggagacctttctgcctctcgactatttggaggtgaaaccc
acagatgagaaactgagagagcttcggggggcaaagctggtgatcgacgtgatccgctat
gagccgccacacataaagaaagcccttcagtatgcctgcgggaatgctttagtgtgcgag
aatgtggaggacgctcgcaggattgccttcggaggaccataccgtcataagactgtggcc
ctggatggaactctcttccaaaagtcaggtgtgatctctggaggagctagcgacctgaaa
gcaaaggctcgacgttgggacgagaaggctgtggacaaacttaaggaaaagaaagagaaa
ctaacagaggaattgaaggaacaaatgaaggcaaagagaaaggaggcagagctcagacag
gttcagtctcaggcacacgggctgcagatgagactcaaatactctcagagtgatctggaa
cagaccaaaacccgccacctctctctgaacatgcaggagaaatcaaagttggagagtgag
ctggcaaattttggcccacgaatcaatgacataaaacgaatcatccaatcacgagagagg
gacattaccgagttaagagatcgcatgaacctggtggaggatgaggtctttgttgaattc
tgtgaggagattggcgtgcgaaatatccgagagtttgaagaggaaaaagtgaagaggcaa
aatgagattgccaaaaaacggctggagtttgagacacagaagacccgtctggccatccag
cttgattatgagaagaaccagttgaaggaggaccaggagaaagtgatgatgtgggaacag
actgtaaagaaggatgagaatgagattgaaagacttaaaaaggaggaacacagacatatg
aaaatcattgatgagacaatggcacagctacaggacctgaagaaccagcatctcactaag
aagggagaggtcaatgacaagaaccgagagatggaggagatccgtaagaaactagggtct
gccaacaaagagctgacgcagctgcagaaggaagtaaccgccattgagaccaaactggaa
cagaaacgcagtgacagacacaacttactgcaagcctgcaagatgcaggacatcaaacta
cccctcaaatcagggacaatggatgacatcagccagggagagggaagctcgcaagttgag
gattcgatcagcagcccgaaggcatcaagttctgtgcatgccaaagaggccctcatagag
attgactacagcaacttaaatgaggacctcaaggattctctgtcagaagaagagatcaag
gcagagatgaacaccctacagcagaggctgaacgagcagcaaagcatcctgcagagaatc
agcgctcccaacatgaaggccatggagaaactcgagagcgttagagacaagttccaggag
accagtgatgagtttgaagctgctcgaaaaagagccaagaaagccaaacaagcatttgag
cagatcaagaaagagcggtttgatcgtttcaatgcctgttttgagtctgttgccaccaac
attgatgagatctacaaatcgctgtcacgtaacagcagtgcacaggcattcctggggcca
gagaacccagaagaaccatacttagatggaatcaactacaactgtgtggctccaggaaag
aggttcaggcccatggacaacctgtcaggaggagagaagactgtggctgctttagctctg
ctttttgccattcacagctacaagcctgcacctttctttgtcctggatgagattgatgct
gctttggataataccaacataggcaaggtggccaactacataaaggaccagtcagtccag
aatttccaggccattgttatctctctcaaagaggagttctacacaaaagctgactccctc
ataggagtttaccctgagcaaggagattgtgtcatcagtaaggtgctgacctttgatctt
tcccagtatccggatgccaatcccaatcctaatgattag
DBGET
integrated database retrieval system
