KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130073809
Entry
130073809         CDS       T09701                                 
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
  KO
K16482  centriolar protein POC1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130073809 (poc1a)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rkg03037]
    130073809 (poc1a)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    130073809 (poc1a)
Cilium and associated proteins [BR:rkg03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   130073809 (poc1a)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EML WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_HPS5 RMC1_N Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_NWD2_C Beta-prop_WDR19_1st PROPPIN Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Nucleoporin_N DUF7165 Hira Beta-prop_VPS8 Proteasome_A_N
Other DBs
NCBI-GeneID: 130073809
NCBI-ProteinID: XP_056095402
LinkDB
Position
Unknown
AA seq 310 aa
AHTGTVRSVSFSSDGQTLVTASDDKSIKVWTVHRQKFLFSLNQHINWGESSVFRAHTGTV
RSVSFSSDGQTLVTASDDKSIKVWTVHRQKFLFSLNQHINWVRCARFSPDGRLIVSASDD
RTVKLWDKNSRECVHSFCDHGGYVNTVAFHPSGTCVAAAGTDNTVKVWDIRSHRLLQHYQ
VHSAAVNGLSFHPSGNFLISASNDSTLKILDLLEGRLLYTLHGHQGPATCVSFSRTGDFF
ASAGSDQQVMVWRTNFDSVDYSAVLEQRCAADSSASVHSGPFTQESEAAGVSAGRSSHRS
ASRAGVDSPG
NT seq 931 nt   +upstreamnt  +downstreamnt
ggctcatacggggacggtgcgcagcgtgagcttctccagtgatggtcagacactcgtcac
cgcgtctgatgacaagagcatcaaagtctggaccgtccatcgccagaagttcctcttctc
cctcaaccagcacatcaactggggcgagtcctctgtgttcagggctcatacggggacggt
gcgcagcgtgagcttctccagtgatggtcagacactcgtcaccgcgtctgatgacaagag
catcaaagtctggaccgtccatcgccagaagttcctcttctccctcaaccagcacatcaa
ctgggtgcgctgcgccaggttttcccctgacgggcgtctgatcgtctctgccagcgatga
cagaacagtgaagctgtgggataagaacagcagagagtgtgttcactcgttctgtgatca
cggcgggtatgtgaacaccgtggcgtttcacccgagtggcacctgtgtggcagcggctgg
cacagacaacacagtgaaggtgtgggacattcgctcacacagactcctgcagcactatca
ggttcatagtgcagcggtgaacggcctctccttccatccgtctggaaacttcctcatctc
agcctccaacgactccacactcaagatcctggacctgctggagggccggctgctctacac
actgcacggccatcagggtcctgccacctgtgtgagcttctccaggaccggagacttctt
cgcctccgctggctctgatcaacaggtgatggtgtggaggacgaacttcgacagtgtgga
ttacagtgccgtgctggagcagagatgtgctgcggactccagcgcttcggttcacagcgg
cccgttcacacaggagtcagaagccgctggtgtgtccgctggccgatcctcacacaggag
tgccagcagagccggtgtggactcgcctgga

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