Rhinichthys klamathensis goyatoka (western speckled dace): 130074008
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Entry
130074008 CDS
T09701
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130074008 (astn1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130074008 (astn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
ASTN_2_hairpin
TM_ErbB1
fn3
Pur_ac_phosph_N
NDNF
MACPF
Motif
Other DBs
NCBI-GeneID:
130074008
NCBI-ProteinID:
XP_056095454
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MLLPHSGMLIGVLWTVIFNSSGVKCLNGEEDQSQDMECKMKSVTVSALPFLRENDLSIMH
SPSASEPKLLFSVRNDFPGEIVVVDDLENTELPYFVLEISGNSEDIPLVRWRQQWLENGT
LLFHIHHQDGSQNLPGPAATAYPASDSAEEELRILHISVMGGMIALLLSILCLVLILYTR
RRWCKRRRVPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGHNSSGTLSIRETP
ILDGYEYDITDLRHHLQRECMNGGEDFTSQMTRTLDSLQGCNDKAGMDLTPGSDSTKLSL
MSKYKDNIIATSPVNSNHQQNTLLPHNTSTNQRKRLSSKTHAGSVFLNPDGDSGTEADSE
PQLTFYTDPNRSRRRSRGMRNGNVNTAWGSGGSPRSPINKTTLTLISVVSCVIGLVCASH
LSCSLNVRVILHVPEHLIADGSRFVLLQGSQLDASDWLNPAQVLLYYQQNASGPWVNDLC
GRRLLDPCEHQCDPDSGECICFDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQRGFDLVM
GEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREELM
ISSSFDSLEVLLDSFGPVRDCSKDNGGCSRNFRCISDRKLDSTGCVCPPGLSPMKDGTGC
YDHHIGIDCSDGFNGGCEQLCLQQLAPLEEDPTLYNIQMFCGCIEDYKRGSDGRSCQPLS
EACTEGVDCGDTADIPANQTVFGDLFYGYNNHTKEITSGQILKATFRQKNFARGIEQQLP
DGMVVASVPTESQCHEELSDPVPDPEYLTGMVNYSEVTGYPLVQHWKLRSIMYHVKLNQW
TLSQAFSSAIHSLDGATLRSDFVSILKEFGNHFIQEAVYGFEESCTIWYPNKQVQRQLWL
EYQDISKGNSPSDESEERDKEPRTLTYPAYIASLLDSGAKRMAAGVRMDCSSQGQCPLSC
HLCHMSPGPARPAEPVLLNITKATPIYELVNGNDTYQALQEAMMSVLWCSAKGDVIDDWC
RCDSSAFGTDGLPTCAPLPQPMLKLSHSYEPSSSLIIIEWNHAEPPIGVRIVDYLISQEK
VTERTDHSKVETETMLSFVDDIMSGAKSPCVMLGDIPDPLSSISLIIRCLEPDTTYMFRL
WAVDNTGRRSSPSEVTIKTPCPAVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLMDLG
SPTLHRVLYHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDELSGWCRGLLQEPKIGLR
RASLKYLSCRYTDTKAFGLSWVNLSQDLRKACEDQMLSVMYNDYGEPKEL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgctactaccacactccggtatgcttatcggcgttctctggactgtcatcttcaattca
tctggggtaaaatgtctgaacggcgaagaagatcagtctcaagacatggagtgcaaaatg
aaaagcgttacggtatccgcgttgccgtttttgcgagagaacgacctgagcatcatgcac
agcccgtcggcctccgagccaaagctgttattctccgtcaggaacgattttccgggcgaa
atagtcgttgttgacgacttggaaaataccgagctcccgtactttgtattggagatctct
gggaactctgaagacatccccctggtgcgctggaggcagcagtggttggaaaatggcact
ttgctcttccacatccaccaccaggacggcagtcagaacctgcctggcccggcggccacc
gcttaccccgctagtgactccgcagaggaggagcttcgcatcttgcacatctctgtcatg
ggtggtatgatcgctcttctgttgtccatcctgtgtttggtgttgatcctgtacactcgt
agacgctggtgtaaacgtcgccgggtacctcagccgcagaagagcgctagtgctgaagca
gccaatgagattcactacatcccctcggtgctgatgggtggacaggcccgggaaagtttg
agaaattctcgcgggcagggccacaactcgagcggcaccctcagcatccgtgagactccg
atcttggatgggtacgagtatgacatcacagacctacgacaccacctgcagcgggagtgc
atgaatggcggagaggacttcaccagtcagatgacacgtacacttgactcacttcaaggg
tgcaatgacaaagctggcatggacctcactccagggagtgatagtacgaaactgtcccta
atgagcaagtacaaggataacatcatagctaccagtcctgtcaacagcaatcaccagcaa
aacacactcctcccacacaatacctccaccaaccagcgcaagcgtctgtccagcaaaacg
catgcgggttcagttttcctgaacccggacggggactctggaactgaggcagacagtgag
ccgcagttgaccttctacaccgacccaaaccgcagccgccgtcgcagtcgaggtatgaga
aacggtaacgtcaacaccgcgtggggctccgggggttccccacggagccctatcaacaag
accaccctgactttgatcagcgtggtgagctgtgtgatcggcctggtctgtgcgtcccac
ctctcctgtagcctcaacgtcagagtcatactccacgtaccagagcacctcattgcagac
ggctccagatttgttctgcttcagggcagccagctggatgcttctgattggctgaaccca
gcccaggtgctgttgtactaccagcagaatgcaagtggcccctgggtcaatgatctgtgt
ggccgccgtctcttggatccctgtgagcaccaatgtgacccagattcaggagaatgtatc
tgtttcgatggctacatgaaggaccctgttcacaagcatctatgtattcgcaacgaatgg
ggcccaaatcagggcccatggccatacacaattttccaacgtggctttgacttggtgatg
ggagagcagccatctgatcgcatttttagattcacatatactcttggagaaggcatgtgg
ctgccacttagcaaaagctttgtcattcctcccgctgagctggccatcaacccttctgcc
aagtgtaagacagatatgactgttatggaggacgcggtggatgtcagggaggagctgatg
atttcttcgtccttcgacagtctggaggtgctgctcgactcttttgggcctgtgcgagac
tgttcaaaagacaacggaggctgcagccgaaatttccgttgcatctctgatcgcaagctg
gactccactggctgcgtgtgtcctcctggtttgagtccgatgaaagatggcaccggttgc
tatgaccaccacattggcattgactgttctgacggctttaatgggggctgcgagcagctg
tgccttcagcagctggcacctctggaggaggaccctactctctacaacatccagatgttc
tgcggatgtattgaagattataagagaggatcagacggccgctcatgtcagccgctgtca
gaagcctgcactgagggagtggactgtggggacaccgctgacatcccagccaaccagact
gtctttggggacctcttctatggctacaataaccacaccaaagagattacatcaggacag
atccttaaggccaccttcaggcaaaaaaactttgcccgtggcatcgagcagcagctcccg
gatggcatggtggtggcgtctgtgccgactgaatcccagtgtcatgaggagctgtccgac
ccagtgcctgatccagagtacctcactggaatggtaaactacagtgaggttacaggttac
ccactggttcagcactggaagctacgatccattatgtaccatgtgaagctcaatcagtgg
accctctcccaagctttcagttcagcaattcattcactggatggggctaccctgcgcagt
gactttgtgtccattttaaaagagtttggcaaccattttatccaggaggcagtgtatggc
tttgaggaatcctgtaccatatggtatcccaacaagcaagtccaacgtcagctgtggttg
gaatatcaggatatcagcaaaggaaactctccgtcagacgagtcggaggagcgggacaaa
gaaccacgcacgctcacttacccagcatacattgccagcctgctggactcgggtgccaag
cgcatggcggcaggggtgcgcatggactgcagcagtcagggccagtgccctttgtcctgt
cacctctgccacatgagccctgggcctgcacgtcctgcagagcctgtgctgctcaacatc
acgaaagccacgccaatctacgaactggtcaacggcaacgacacctaccaggctctgcag
gaggccatgatgagtgtactgtggtgctctgctaaaggtgatgttattgatgactggtgt
cgatgtgattccagtgcctttggcacagatggactcccgacttgtgctcctctgcctcaa
cctatgctcaagctatcccattcatatgaacccagcagttcactgatcatcatagaatgg
aatcatgcagagccaccaatcggagtgagaattgttgattacctcatcagtcaagagaag
gtgacagagcggaccgatcactccaaagttgagacagagactatgttgagttttgtggat
gacataatgtccggggccaaatctccgtgtgtgatgctcggggacatccctgatcccctc
tcatctatctcgctgatcatacgctgcctggagccagacaccacatacatgtttcggctg
tgggcggtggacaacacgggtcggcgttccagtccgagtgaggtgacgatcaaaactccc
tgtcctgccgtggatgacgtcaaggctcaagaaatagcagacaagatttacaacctgttc
aacggctacaccagcgggaaggaacagcagacggcctacaacacgcttatggacctgggc
tcaccaaccctccaccgagtactttaccactacaaccagcgctatgagagctttggagag
ttcacttggcgctgtgaagatgaactggggcccaggaaagcaggattgatcctgtctcag
ctggatgaactcagcggttggtgccggggtctcctccaggaaccaaaaatcggcttgcgc
agagcatcccttaaatatctgtcttgtcgttatacagataccaaagcattcgggctcagc
tgggtgaatctcagccaagacttacgtaaggcatgtgaagatcagatgctctccgttatg
tacaatgattatggagaacccaaggaactttaa
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