Rhinichthys klamathensis goyatoka (western speckled dace): 130074042
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Entry
130074042 CDS
T09701
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130074042 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130074042 (sf1)
Spliceosome [BR:
rkg03041
]
Complex A
Other components
Complex A specific factors
130074042 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
130074042
NCBI-ProteinID:
XP_056095516
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFESGPGAGLMAPPVPAVSFPLQTFQQPQLTAPGFPQFP
VAVSSALSNPVGVVLPAQTGSGDFCQKKQRKRSRWSSETPDQKTVIPGMPTVIPPGLTRD
QERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEE
ERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNI
EKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILK
QGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAGH
ISSDCKFTSSFAPRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHNPPTSGSRS
SGPNNNQQPPNRPPWMNSGPTDNRNFHSMHQGPSGPHNFPPPMPNMGVPPMPPNPNGMPP
PWMQPPPPPMGQGPAPPGHHMSLLPPPMSMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTSATGNLPPWQQPQQTATSAAQPPPPMGTPSMVPPPPG
VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPYGMPPAPPPPP
PQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cgaggctttgagtccggccccggcgcggggttaatggcaccgcccgtgcctgcggtttct
ttcccgctgcagaccttccaacaaccgcaattaacagccccaggttttccccagttcccc
gtagctgtgagttctgcgctctcaaacccagtcggagtagtactgccggctcagacggga
agtggagatttttgccagaagaagcagaggaaaaggagtcgttggagcagcgagacgccg
gatcagaagaccgtcatcccgggcatgcccaccgtgatccctcccgggctgactcgggac
caggaacgagcttatatagtccaactgcagattgaagacctgacacgtaaactgcgtaca
ggagacctgggaatccctgttaaccctgaggacagatctccatctcctgagcccatctac
aacagtgagggcaagaggcttaacacgcgtgaatatcgtacacgcaagaagctggaggaa
gagagacattctctcatcacagagatggtggggctgaaccctgaattcaaaccccctgct
gactacaaaccaccagctactcgggttagtgataaggtgatgattcctcaggatgaatat
ccagagatcaactttgttgggcttttgattggtccacgtggaaacactctgaagaacatt
gagaaggagtgctgtgctaaaatcatgattcgtggtaaaggttcagtgaaggaagggaag
gtgggccgtaaggatggacagatgcttccaggagaagatgaacctcttcatgcactggtc
actgctaacaccatggagaatgtgaagaaagctgtagagcagatccgtaatatcctcaag
cagggcattgagacccctgaggaccagaatgatctaagaaagatgcaactgagggagctg
gcacgactcaatggcactctgagagaggatgataacaggatcttgcgcccatggcagagc
acagagcctcgcagcatcacaaacacaactgtctgtacaaagtgtggaggagcaggtcac
atctcatcagactgcaagtttaccagttcctttgctccccggccaggcgaaccaccccag
tctgctcaggataaggcccgtatggataaagagtacttgtctctcatggcagaattagga
gaggctccagtcccttcttccggtggtggccacaatcctcccactagtggatctcgttca
tcaggacccaacaacaaccaacaaccaccaaatcgtcctccttggatgaattcaggccct
accgataacaggaatttccacagcatgcaccagggtcctagtggccctcataacttccct
ccaccaatgccaaacatgggcgtccctcctatgccaccaaaccccaatggaatgccacca
ccctggatgcagccgccccctcccccaatgggccaaggcccagcaccacccggacaccac
atgagtttattgccgccacccatgagtatgatgcccccacctccacctccccccaacaac
caaccaccacctccaccatcaggacctctgccaccatggcaacagcaggcccctccccca
ccacccaccagcagcatggcaaccagtgctccactgccatggcaacagaatacaaccacc
acatccacttctgccactggaaacctgccaccctggcaacagcctcagcagacggccacc
tcagccgctcagccccctccgcccatgggtaccccttctatggtcccgcctccacctggg
gtccaacccccacttcctcctggtgcccccccgccgcctccaccccctccacctggctca
gcaggcatgatgtatgcaccccctcccccacccccacccatggaccctaactttgtgacc
atgatggggattcccggtatgccaccgtacgggatgcctcctgcacctccaccccctccg
ccccagagttaa
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