Rhinichthys klamathensis goyatoka (western speckled dace): 130075160
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Entry
130075160 CDS
T09701
Symbol
si:ch211-197l9.2
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130075160 (si:ch211-197l9.2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130075160 (si:ch211-197l9.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
YabA
Motif
Other DBs
NCBI-GeneID:
130075160
NCBI-ProteinID:
XP_056095726
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MTKTKVDANPESNARSSQHGRDGQNKACGGDAVSHQQSRQIHRHHVQHMTSKQPQANAAP
SQNKTKEIHSKKPKRGLSVTPNIHAGKTEMMKPESRKRSDSNRSKSSGRRKLSDGSITSD
DLSKDSGCATGKLSSTDSSSEISDASEEQKQSTDVQCGEVCHRGTHEEMMDGLAEPISEH
REDDGLINATLSPGFGFGEGSISPGDRSYVSMDSRLNLSASVEFPDLTGDFADGVHEDLL
REIDDLRSENEYLKDEMEELRSEMLEMRDMYMEEDVYQLQELRQQLEQANKACRILQYRL
RKAERRSLRVAQTGQVDGELIRTLEYDIRVAKSVSLRLHSELEAIQKKNSQLEWENEELR
ERLQDLEVAKQVLQAEMDKSQNSLKRRSLRSTSSKSEKKLSPQDDSADLKCQLHFAKEES
ALMCKKLTKMALESEAMREELAKYRLLYGDVDENQAAAGTTNSAHTREAEVKVHLRLVEE
EATLLSRRIVELEVENRGLRAEMSELRERGGGSLEEEEMVKGAGEGLALREQEEVLKGGC
LDGVEKADALTIHNNTQEIQMRAEEEHMENSIHMHREGSIDGEQELSAETKEEDGRAQCK
SDCTFGVKDLEGLLAIHDQALLVRSTIQLLTAPAKNGVSPTYAHKTHPGGPYLSKTTVDP
QCKTHQWLLDPMLSPLTNGLEVLQAQLRALVEKLEVLSNSTSEHSGPVTEKNILHFGEDL
SAMKEDTKNQARQERPCEEICGNGCNQDSLVLLTLQLRWFIQQWRQGERPTGDGKNLFEM
YCQNEIHLLKDTESRACEYNLQEKCNSQVSSALLSDLRTALQDLFCELWEQHRAAQFVVR
QFANAKAAWAVECTELKSLISKLEGPAGKAGIKGPSDVNAALQKDHVEKLQHLLAESYTA
VMDLTRQLKVCESNWSSERQELLEHLNHVRLECERSKTAKQNRKMQSPRNKMTKDGKMER
MTLKTGILKPNKNWKYLSHEAAFLDREDGCKTWDCPIMPSSFPGLNLNQELTQRSHTAPE
RTSIRIYFSPPSAKRIQMSSLVAGEEEECEESQEPHFNAFSCGLVNRDWVSAYENWLGSV
PIDCQNLTERAVISSTSCSGLQTSSIASPSRLAFNSMDVSANLSDDMKEITASVLQTTQS
SPLERKRGKDFGSNVASVVSTGTQTQSQPQVTTVGLQTDGPRSLYTAKHWSPRVTSFVSA
RAHQTSASLERVPGPAERFPPHSTSPKIQRRHSTSSKSSTSPSSSSSFTTSSLSSSSSLS
ASSRMDYAAKERGLWALSQRGSTPSRPSSVSAQASNKPGGRKTVGVHKYGLVQEFLRNVC
GRGEKTNPAMEKAPAARRDHVGLVGSKKSEHPPSRIPAVPLVRNDSITKIVNRRFMKNSQ
KEEAVCHSQTQTQRQIDRGSISKNKGLEDGACDCSSRSLTSCFARPSQKNLRQAHSQNKP
RPHEYPTTRGKGDPQA
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaccaaagttgatgccaatcctgagtctaatgcacgctcatcccagcacgga
cgggacgggcagaataaagcctgtggaggagacgcggtcagccaccagcagtcaagacaa
atccaccggcaccatgtgcaacacatgacgtcaaaacaacctcaggcgaacgcagctccc
tcacagaacaagactaaggagattcactccaagaaaccaaagcgtggattatctgtcacg
ccaaacatccatgctgggaaaacggagatgatgaaaccagagtcgagaaaacgctccgat
agcaatcgcagtaaatcttccgggagaagaaagctatcggatggaagcatcacgtctgat
gacctgagtaaggactctggctgtgctaccgggaaactgtcttccacggacagcagctct
gagatctcggacgcatctgaggagcaaaagcagtccactgatgtccagtgtggtgaggtc
tgtcacagaggaacccacgaagagatgatggacggtttagctgagccaatatcagaacat
agagaagatgatggtctgatcaatgccaccctgtccccggggtttggcttcggcgaggga
agcatctctcctggagaccggtcctacgtttccatggacagtcgcttgaacttgagcgca
tctgtggaatttccggatctgactggagactttgctgatggggtgcatgaggatctgctg
agagagattgacgacctaagatcggaaaatgaatatttaaaggacgaaatggaggagctc
cgttcagagatgctggagatgagagacatgtacatggaggaggatgtttaccagctgcag
gaactccgacagcagctggaacaggccaataaggcctgtcgcatcttgcagtaccgactc
aggaaagctgagagacgcagcctgcgtgtagcccagacgggacaggtggacggcgagctt
atcagaacacttgagtatgacattagggtggcaaaaagtgtgtcccttcgcctgcacagc
gaacttgaggccattcaaaagaaaaattcacagctagaatgggaaaacgaggagttgcgt
gaacggctgcaggatctggaggtggcgaagcaggtcctgcaggcggagatggacaaatca
cagaattctctaaagagaagaagtttgagatcaacatccagcaagagtgaaaagaaactc
tctccacaggatgacagtgctgatttgaaatgccagctccactttgccaaagaagagtct
gcgctcatgtgcaagaagctaacaaagatggccctggagagtgaggcgatgcgggaggag
cttgccaaataccgtcttttatacggtgatgtagatgaaaaccaggctgcagcgggcacc
actaactccgcccacacccgagaagcagaggtcaaagttcacttgcggctggtggaagaa
gaagccacgctgctgagtcgtcgaattgtggaactagaggtagagaaccgtggtttgcgg
gcagagatgagtgaactgcgtgaacgaggaggaggaagcttggaagaagaggagatggtg
aagggagctggtgaagggttagcattgagggagcaggaggaggtgcttaaaggtggatgt
ctggatggtgtagagaaagcagatgcgttgacaatccacaataatacgcaggagatccag
atgcgtgcagaggaagaacacatggagaactctatccacatgcacagagaagggtcgatc
gatggggaacaggagctttctgcagagactaaagaggaagatgggcgagctcaatgtaag
tcagactgcacgtttggtgtgaaggatctagaaggtcttcttgccatccatgaccaagcg
ctgcttgtcagatcaactatccagctcctgacagccccagctaaaaatggcgtatcacct
acatatgcccataagacccatcctggtggcccttacctaagcaaaacgacagtggatcct
cagtgcaagacacatcaatggcttttggaccccatgttaagtcccttgaccaatggacta
gaagtgttacaagcccagctgcgtgctcttgtagaaaagttggaggtgctgtcaaactct
acttcagagcactctgggcctgttacagaaaagaatatattacattttggtgaagattta
agtgcaatgaaagaggacacaaagaatcaagcaagacaagaacgtccatgtgaagaaatt
tgtggaaatgggtgtaaccaggacagcttagtgctgctcacactgcagctccgatggttc
atccagcagtggcggcagggagagagacccaccggagacggaaagaacctgtttgagatg
tattgtcagaatgagattcatcttctaaaggacacagagtcaagagcatgcgagtacaat
cttcaagagaaatgcaactctcaggtgagcagtgccctgctgtctgacctgaggacagcc
ctgcaggatctgttctgtgaactctgggagcagcacagggcagcccagtttgtcgtccga
cagtttgcaaacgccaaagctgcgtgggccgttgagtgtacagagctcaagagcctcata
agcaagctggagggtccagctgggaaggcaggaataaagggtccatcagatgtgaatgcg
gctttgcagaaggaccacgttgagaagcttcagcacctgttagctgagtcctacactgca
gtcatggacctgacaagacagctgaaggtctgtgagagcaactggagctctgaacggcag
gaactgctggaacacctgaaccatgtgcgtctagagtgcgaaaggtcgaagacagcaaag
caaaatagaaaaatgcagtcccccagaaataagatgacaaaagatggaaaaatggaaagg
atgactctcaaaactggcattttaaaacccaacaagaactggaagtacctcagtcatgaa
gctgcctttctggacagagaagacggctgtaagacttgggactgccctatcatgccttcc
agtttccctggtttgaacctaaaccaggagctgacccagagaagccacactgctccagag
aggaccagcattcgtatatatttcagcccaccatcagcaaaaaggatccaaatgagctct
ctggtagcaggagaggaggaagagtgtgaggagagccaggaaccacatttcaatgctttt
tcctgtggccttgtaaaccgagactgggtctctgcatatgaaaactggctgggcagcgtg
ccaattgactgccaaaatttgacggagagagctgtcatcagttctacatcctgttcaggt
cttcagacctccagtattgcttccccttcacgcttggctttcaatagcatggacgtctca
gccaacttgagtgatgacatgaaggaaattacagccagtgtgcttcaaaccacccaatcc
agccctctagagaggaaaagagggaaggattttgggagcaatgtagcgagtgttgtgagt
acgggaactcaaacacaatcccaaccacaggtgaccacagtcgggctacagaccgatggc
cctcgaagtctttataccgcaaagcactggtcaccccgggtgacctcatttgtatccgct
agagcccatcagacgtcagcatcattggaaagggtacctggacctgcagagcgctttcca
ccacattccacctcgccgaaaatacagcgcagacactctacatcctctaagtcttccact
tcaccatcatcctcttcatccttcactacatcctctttgtcctcttcctcatctctgagc
gcctcctccaggatggattatgcagctaaggaacgcggtttgtgggctctgtcgcaacgt
ggatcgacacctagcaggccaagctcagtatcagcgcaggccagcaataaacctggcggt
cgtaaaactgtaggagtccacaagtacggtctggtccaggagtttctgcgcaacgtgtgt
ggccgaggagagaagaccaacccggcgatggagaaagctccagcggctcgtagggatcat
gtcggactggtgggttcaaagaaatcggagcatcccccgtctcgtataccagcggtgcca
ctggtcagaaatgacagcatcactaagatcgtgaaccgcagatttatgaaaaacagccaa
aaagaggaggcagtctgtcatagtcagacccaaacccaacgccaaatcgacaggggttca
atcagcaagaacaagggcttggaggatggagcctgtgactgcagctcacgctctttgaca
tcctgctttgctcgaccctcccaaaaaaacctccggcaggctcacagtcagaacaagccc
cgtccacatgaataccccacaactcgtggtaaaggtgaccctcaagcctaa
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integrated database retrieval system
