Rhinichthys klamathensis goyatoka (western speckled dace): 130075250
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Entry
130075250 CDS
T09701
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130075250 (ubtf)
03021 Transcription machinery [BR:
rkg03021
]
130075250 (ubtf)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
130075250 (ubtf)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
130075250 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130075250
NCBI-ProteinID:
XP_056095798
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MNGEMDSSAKEIVWEQSDLLKLLDAMKVNLPDKDLSKYKTSESHLDWEKVAFNSYSAEMC
KQKWLEVSREIRKFRTLSELIVDAQDYVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYKELPERKKEKYVKDFLREKESFMVSMMKFRQDHPDLLE
NVNKKSNVPEKPKTPQQLWYSHEKKAFLKGRPDATTKDIKDSVAKQWPQLSDKKRMKWIM
KSLEQHKLYEGTMREFIQQHPELNITQEDIVKSTLTKAERQLKDKFDGRPDKPPSNGYSM
FCAELMSSMKDVPSTERMVMCSQRWKLLKQSEKDAYQKRCEQKKKEYEVEMNRYLLSISE
EEQQRIMSEQKMGSFKRGGGGSSPASKKKSATAKSAEKPKPPVSAMFIFSEEKRPKLHQE
RPDLSDMELTRLLARMWNELSDKKKEKYKTLEMTLKADSEKQSKEDKGKLPETPKTAQEI
WQQSVIGDYLARFKNDRAKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRSP
APVFIMGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRLPQKE
KDHYKRMAEEKQRQYRVLLEQWLASITPQERTVYKEYNSLKRRSTIKPGGTNAKVKPKAK
VSEDEEEDDDDNDDDEEKESDDGSSSDDSDDDDDDDDDDEDDNEDMEDEEVEDKENKTES
SSSASSSDSSGSDSD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggactcctctgctaaagagatcgtttgggagcagagtgacctattg
aagctcttggatgccatgaaggtgaacctgccagataaggatctgtccaagtacaagacg
tccgagtcccatttggactgggagaaagtggcttttaactcatactctgcggagatgtgc
aaacagaaatggctggaagtttcacgtgagatacgtaaattccgcaccctctctgaactg
atcgtggatgcacaggactatgtcaaaaatccatacaaaggaaagaagctgaagaaacac
ccagacttccccaaaaagccattgacaccgtatttccgtttctttatggagaagcgtgcc
aagtatgctaaactacatccagagatgagcaatttagatctcacaaagatcctgtccaaa
aaatacaaggagctcccagagcgtaaaaaagagaaatacgtgaaagactttctcagagaa
aaggagtctttcatggtcagcatgatgaagttcaggcaggatcatcccgaccttctagag
aacgttaataagaagtccaatgttccagagaagcccaagacaccccagcaactgtggtac
agccatgagaagaaggcctttctcaaaggacgcccagatgcgaccaccaaagacattaag
gatagtgttgcaaagcagtggccacagctgtcagacaagaagaggatgaagtggatcatg
aagtctctggagcagcacaaactgtatgaggggacaatgcgcgagtttatccagcagcac
ccagagttgaacatcacgcaggaggacatcgtcaaatccactctgaccaaagcagagaga
cagctcaaggacaagtttgatgggcggcccgacaaaccaccttctaatggttactcaatg
ttctgtgctgagcttatgtccagtatgaaagacgtccccagtacggagcgtatggtcatg
tgcagccagcgctggaaactcctcaaacagagcgagaaagatgcttaccaaaagcgctgt
gaacagaaaaagaaagaatatgaagttgagatgaatcgctacttattaagtatctcagag
gaggaacagcagagaataatgtcagaacagaagatgggcagctttaaaaggggaggtggt
ggcagcagccccgcttctaaaaagaagagcgccacagcaaagtctgcagagaagcccaag
ccccctgtgtctgcaatgttcattttctcagaagagaagcgcccaaaacttcatcaggaa
aggcctgatctttctgacatggagctcaccagacttctagcccgcatgtggaacgagctt
tctgacaagaagaaggagaagtataaaactctggagatgacgctgaaggcagactctgaa
aagcagagcaaagaggacaaagggaaactaccagaaacacccaaaacagctcaggaaatc
tggcaacagagtgtcattggagactatctcgcccggttcaagaatgatcgagcgaaagct
cagaaagccatggaggccacctggaataccatggagaagaaagagaagatcatgtggatc
aagaaggctgcagaggaccaaaagagatatgaaagagagctgagtgagatgcgatcacct
gccccagtctttatcatggggaagaaaatgaaatttgatggggaacctaagaaaccaccc
tctaacggttatcagaagttctctcaagagatgctgtcgaacggtgagctgaaccatctg
cccatgaaagagcgcatgggtgaaatcggaggccgctggcagcgactccctcagaaagag
aaggaccattacaaaaggatggcggaggagaaacagaggcagtacagagtgcttctcgag
cagtggcttgcgagtataacacctcaggagagaactgtgtataaagaatataactcactg
aaacggaggagcacaataaaacctggtggcacgaatgctaaagtgaaacccaaggccaaa
gtatcggaagacgaagaggaggatgatgacgacaacgatgatgatgaagagaaggaatct
gatgacggatcatcctctgatgacagtgatgatgatgatgatgatgacgacgatgacgaa
gatgataatgaagacatggaggatgaagaggtggaggataaggagaataaaacagaaagc
agcagcagtgcttccagctctgattcatcgggttcagactcggactga
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